RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.36
COL6A1-207ENST00000612273 SLC22A18ASQ8N1D0 253 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 RTN4RQ9BZR6 473 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 POMT2Q9UKY4 750 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 MOKQ9UQ07 419 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 A6NCN8 305 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 B8ZZF3 427 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 KCNJ13O60928 360 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 RNH1P13489 461 aaKnown RBP12.77□□□□□ -0.37
COL6A1-207ENST00000612273 TACR3P29371 465 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 PTGS2P35354 604 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 SORDQ00796 357 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 TEX19Q8NA77 164 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-207ENST00000612273 HGDQ93099 445 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 ATG5Q9H1Y0 275 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 EXO5Q9H790 373 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 ICAM5Q9UMF0 924 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 FREM3P0C091 2139 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 C17orf105B2RV13 164 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 TNFSF14O43557 240 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 MAP3K8P41279 467 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 POU3F4P49335 361 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 TUSC1Q2TAM9 212 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 GLDNQ6ZMI3 551 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-207ENST00000612273 ZBTB44Q8NCP5 570 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
COL6A1-207ENST00000612273 NXF5Q9H1B4 397 aaKnown RBP12.77□□□□□ -0.37
COL6A1-207ENST00000612273 YBX2Q9Y2T7 364 aaKnown RBP12.77□□□□□ -0.37
COL6A1-207ENST00000612273 UBE2QL1A1L167 161 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 ACOT7O00154 380 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 CLDN4O14493 209 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 EIF1AYO14602 144 aaKnown RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 OR6A2O95222 327 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 CD14P08571 375 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 CTHP32929 405 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 ARHGAP40Q5TG30 622 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 TGM7Q96PF1 710 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 ELOVL3Q9HB03 270 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 FAM25EA8MYX2 175 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 CCSO14618 274 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 MPZL1O95297 269 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 IGF2P01344 180 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 TACSTD2P09758 323 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 EIF1AXP47813 144 aaKnown RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 FAM69AQ5T7M9 428 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 BPHLQ86WA6 291 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 OR2G2Q8NGZ5 317 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 THAP3Q8WTV1 239 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 HAVCR1Q96D42 359 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 SEC22AQ96IW7 307 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-207ENST00000612273 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
COL6A1-207ENST00000612273 ANKRD20A5PA0PJZ0 165 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 KCNAB3O43448 404 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 GPRIN2O60269 458 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 UPK3AO75631 287 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 RRASP10301 218 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 RBM34P42696 430 aaKnown RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 MESTQ5EB52 335 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 CLLU1Q5K131 121 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 MARCH3Q86UD3 253 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 TSLPQ969D9 159 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 DHCR7Q9UBM7 475 aaKnown RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FBXL21Q9UKT6 434 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FBXL3Q9UKT7 428 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FANCMQ8IYD8 2048 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FITM1A5D6W6 292 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FOXS1O43638 330 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 SDC3O75056 442 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ECDO95905 644 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 TNFP01375 233 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ITGA5P08648 1049 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 NUDT1P36639 197 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 GFERP55789 205 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 HACD4Q5VWC8 232 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 NKAIN2Q5VXU1 208 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ZCCHC12Q6PEW1 402 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 C16orf47Q6ZP98 133 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 TAAR8Q969N4 342 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 CCDC74AQ96AQ1 378 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 COMMD4Q9H0A8 199 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms