RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 MT-ATP6P00846 226 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 C1QTNF9P0C862 333 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 ZNF17P17021 662 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 RPL4P36578 427 aaKnown RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 KLHL22Q53GT1 634 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 ALG10Q5BKT4 473 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 ZMAT1Q5H9K5 638 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 MAMDC2Q7Z304 686 aaPredicted RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 NRARPQ7Z6K4 114 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 UBQLNLQ8IYU4 475 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 OR5J2Q8NH18 312 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 TMEM163Q8TC26 289 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 ERMAPQ96PL5 475 aaPredicted RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 GPX7Q96SL4 187 aaPredicted RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SRRQ9GZT4 340 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SLC6A15Q9H2J7 730 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 MOV10Q9HCE1 1003 aaKnown RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 FGF20Q9NP95 211 aaPredicted RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SERINC1Q9NRX5 453 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SLC6A5Q9Y345 797 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 RAMP1O60894 148 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 AKR7A3O95154 331 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 NOS3P29474 1203 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 RFX2P48378 723 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 STARP49675 285 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 NKX2-5P52952 324 aaPredicted RBP15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 WNT4P56705 351 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 CLDN20P56880 219 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 OR2B6P58173 313 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 GPR50Q13585 617 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SGCBQ16585 318 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 WDFY1Q8IWB7 410 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 CYB561A3Q8NBI2 242 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 SLC38A2Q96QD8 506 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 POTEKPQ9BYX7 375 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 NRIP3Q9NQ35 241 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 GRIP1Q9Y3R0 1128 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 LIPGQ9Y5X9 500 aa15.55■□□□□ 0.08
PPFIA3-207ENST00000602716 TNRC6AQ8NDV7 1962 aaKnown RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 TEX13CA0A0J9YWL9 993 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 TMEM129A0AVI4 362 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 PRODHO43272 600 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 CCNKO75909 580 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 ITGB2P05107 769 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 HLA-DOBP13765 273 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 HIST1H1CP16403 213 aaKnown RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 MYL12AP19105 171 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 PLGLB1Q02325 96 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 RAB40BQ12829 278 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 CRMP1Q14194 572 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 BAK1Q16611 211 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 C5orf46Q6UWT4 87 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 FAM122BQ7Z309 247 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 ZFP62Q8NB50 900 aaPredicted RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 LSM14AQ8ND56 463 aaKnown RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 SDR9C7Q8NEX9 313 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 MFSD8Q8NHS3 518 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 RNFT2Q96EX2 444 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 Q96M85 177 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 SFXN2Q96NB2 322 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 TSPAN32Q96QS1 320 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 PIGQQ9BRB3 760 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 TPK1Q9H3S4 243 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 FN3KQ9H479 309 aa15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 RBMX2Q9Y388 322 aaKnown RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 SPIN1Q9Y657 262 aaPredicted RBP15.54■□□□□ 0.08
PPFIA3-207ENST00000602716 IRGMA1A4Y4 181 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 K7ENP7 123 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 PLPP3O14495 311 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 IL7P13232 177 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 NR4A2P43354 598 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 GFRA1P56159 465 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 CTXN1P60606 82 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 MXD1Q05195 221 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 C22orf42Q6IC83 251 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ZNF544Q6NX49 715 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 INO80CQ6PI98 192 aaPredicted RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 DPY19L2P2Q6ZN68 376 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 TRILQ7L0X0 811 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 GGNQ86UU5 652 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 OR4K13Q8NH42 304 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 SLC25A43Q8WUT9 341 aaPredicted RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 NEDD4LQ96PU5 975 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 MIXL1Q9H2W2 232 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ISYNA1Q9NPH2 558 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 CMC2Q9NRP2 79 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 MRPL39Q9NYK5 338 aaKnown RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 PLEKHB1Q9UF11 243 aaPredicted RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ANKRD11Q6UB99 2663 aaPredicted RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 A0A0J9YW62 118 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 OR2T1O43869 369 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 FZD7O75084 574 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 WISP2O76076 250 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 APOL3O95236 402 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 HIST1H2ABP04908 130 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 CLEC2LP0C7M8 214 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 CLUP10909 449 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 AZGP1P25311 298 aaKnown RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 DIO1P49895 249 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms