RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 RGMAQ96B86 450 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 DNAJA3Q96EY1 480 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 TMEM19Q96HH6 336 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 CLCC1Q96S66 551 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 GGACTQ9BVM4 153 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 TMPRSS13Q9BYE2 586 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 EXO5Q9H790 373 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 C1GALT1Q9NS00 363 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 GFOD1Q9NXC2 390 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 MRPS2Q9Y399 296 aaKnown RBP14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF888P0CJ79 500 aaPredicted RBP14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 F3P13726 295 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 ADCYAP1P18509 176 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 KCNAB1Q14722 419 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 PLEKHN1Q494U1 663 aaPredicted RBP14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF793Q6ZN11 406 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 SMIM4Q8WVI0 70 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 GPA33Q99795 319 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 EPHX3Q9H6B9 360 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 TMEM74BQ9NUR3 256 aa14.06□□□□□ -0.16
PPFIA3-206ENST00000602655 CEP250Q9BV73 2442 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 OR2M5A3KFT3 312 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 C5orf52A6NGY3 159 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 SPI1P17947 270 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 PEBP1P30086 187 aaKnown RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 LIMS1P48059 325 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 PDZD11Q5EBL8 140 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF626Q68DY1 528 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 LIN54Q6MZP7 749 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 C3orf33Q6P1S2 294 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 CMTM4Q8IZR5 234 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 NUBPLQ8TB37 319 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 WFDC6Q9BQY6 131 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 NAA11Q9BSU3 229 aaPredicted RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 C20orf24Q9BUV8 137 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 SMCO4Q9NRQ5 59 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 DSPPQ9NZW4 1301 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 CPED1A4D0V7 1026 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 H7C1Q1 480 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 CTSVO60911 334 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 GNSP15586 552 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 STXBP1P61764 594 aaKnown RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 PPIAP62937 165 aaKnown RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 TMEM69Q5SWH9 247 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 RNLSQ5VYX0 342 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 CLEC9AQ6UXN8 241 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 NDUFAF7Q7L592 441 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 TPRA1Q86W33 373 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ARMC10Q8N2F6 343 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF561Q8N587 486 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 FAM46AQ96IP4 442 aaKnown RBP14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ADAP2Q9NPF8 381 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 DMRT1Q9Y5R6 373 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ASPMQ8IZT6 3477 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 SHISA7A6NL88 538 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 NR2F1P10589 423 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF44P15621 663 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 TBXA2RP21731 343 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 AQP2P41181 271 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 SHISA6Q6ZSJ9 500 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 TREM2Q9NZC2 230 aa14.05□□□□□ -0.16
PPFIA3-206ENST00000602655 BTBD17A6NE02 478 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 B4GALT2O60909 372 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 ATP1B1P05026 303 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 CFIP05156 583 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 LIPCP11150 499 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 ADH6P28332 368 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 TAS2R41P59536 307 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 FCRLAQ7L513 359 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 LRRC56Q8IYG6 542 aaPredicted RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 MUC20Q8N307 709 aaPredicted RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 ACOT4Q8N9L9 421 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 OR1J4Q8NGS1 313 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 GAL3ST3Q96A11 431 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 C16orf58Q96GQ5 468 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 LINC00615Q96LM1 132 aaPredicted RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 TMEM68Q96MH6 324 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 DERL3Q96Q80 235 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 CXorf36Q9H7Y0 433 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 OR2S2Q9NQN1 319 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 ZNF230Q9UIE0 474 aaPredicted RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 KCNAB3O43448 404 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 OR2A4O95047 310 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 YIF1AO95070 293 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 DAOP14920 347 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 THBS2P35442 1172 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 DLSTP36957 453 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 ENPP2Q13822 863 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 SKA3Q8IX90 412 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 DNAAF1Q8NEP3 725 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 BRIX1Q8TDN6 353 aaKnown RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 MAFIPQ8WZ33 124 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 UBE2E3Q969T4 207 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 OR2A7Q96R45 310 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 TMPRSS5Q9H3S3 457 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 WSB2Q9NYS7 404 aaPredicted RBP14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 WASF3Q9UPY6 502 aa14.04□□□□□ -0.16
PPFIA3-206ENST00000602655 HELZP42694 1942 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms