RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PLA2G5P39877 138 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CENPAP49450 140 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CLDN15P56746 228 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CLDN18P56856 261 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 PMP22Q01453 160 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 DBPQ10586 325 aaPredicted RBP16.07■□□□□ 0.16
VRK3-225ENST00000601912 MED22Q15528 200 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 EEF1A1P5Q5VTE0 462 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 NHLRC1Q6VVB1 395 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 NANOGP1Q8N7R0 232 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 ADAD1Q96M93 576 aaKnown RBP16.07■□□□□ 0.16
VRK3-225ENST00000601912 TSSK2Q96PF2 358 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 UCN2Q96RP3 112 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CNN2Q99439 309 aaKnown RBP16.07■□□□□ 0.16
VRK3-225ENST00000601912 JAM3Q9BX67 310 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 NUAK2Q9H093 628 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 RERGLQ9H628 205 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 INPP5EQ9NRR6 644 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 KLHL13Q9P2N7 655 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CLEC2DQ9UHP7 191 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 J3QRE1 110 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 SMAD9O15198 467 aaKnown RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 TRMUO75648 421 aaKnown RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 MRPL3P09001 348 aaKnown RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 KLK2P20151 261 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 PYCR1P32322 319 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 ETV1P50549 477 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 GTF2A1P52655 376 aaPredicted RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 BLVRAP53004 296 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 GP2P55259 537 aaKnown RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 ACTC1P68032 377 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 ACTA1P68133 377 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 SRYQ05066 204 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 RUNX1T1Q06455 604 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 Q6ZS92 163 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 OR10H4Q8NGA5 316 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 OR6X1Q8NH79 312 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 SLC25A44Q96H78 314 aaPredicted RBP16.06■□□□□ 0.16
VRK3-225ENST00000601912 KCNK17Q96T54 332 aa16.06■□□□□ 0.16
VRK3-225ENST00000601912 ALPK2Q86TB3 2170 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 TMEM129A0AVI4 362 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 FAM171A2A8MVW0 826 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 SLC16A7O60669 478 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 IGHG1P01857 330 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 ITGB2P05107 769 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 TBR1Q16650 682 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 TIGD6Q17RP2 521 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 LINC01590Q5TEZ4 76 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 VASNQ6EMK4 673 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 LHFPL3Q86UP9 236 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 SYT14Q8NB59 555 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 OR9K2Q8NGE7 335 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 ZNRF4Q8WWF5 429 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 DGCR14Q96DF8 476 aaKnown RBP16.05■□□□□ 0.16
VRK3-225ENST00000601912 COG8Q96MW5 612 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 RBP7Q96R05 134 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 EMC6Q9BV81 110 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 RACGAP1Q9H0H5 632 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 TSPAN10Q9H1Z9 355 aaPredicted RBP16.05■□□□□ 0.16
VRK3-225ENST00000601912 ERVK13-1Q9NX77 482 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 B9D1Q9UPM9 204 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 LIPGQ9Y5X9 500 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 DAPL1A0PJW8 107 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 SLC35F4A4IF30 521 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 C12orf71A8MTZ7 269 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 H3BSA7 217 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 DCTN6O00399 190 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 CLDN17P56750 224 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 CLRN1P58418 232 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 SLC17A1Q14916 467 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 SPHARQ15513 63 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 CREB3L2Q70SY1 520 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 CHMP1BQ7LBR1 199 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 CLVS1Q8IUQ0 354 aaPredicted RBP16.05■□□□□ 0.16
VRK3-225ENST00000601912 FNDC8Q8TC99 324 aa16.05■□□□□ 0.16
VRK3-225ENST00000601912 AKAP8O43823 692 aaKnown RBP16.04■□□□□ 0.16
VRK3-225ENST00000601912 SYNGR4O95473 234 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 IGHG3P01860 377 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 PDGFAP04085 211 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 OR2T7P0C7T2 308 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 LIMS3P0CW19 117 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 LIMS4P0CW20 117 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 HSMCR30P0CW71 290 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 NR2C1P13056 603 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 WNT4P56705 351 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 THEM4Q5T1C6 240 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 FOXB2Q5VYV0 432 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 TMPRSS11AQ6ZMR5 421 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 FCRLAQ7L513 359 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 KLHL36Q8N4N3 616 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 OR2T27Q8NH04 317 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 ROBO4Q8WZ75 1007 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 ABHD17AQ96GS6 310 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 OR5M11Q96RB7 305 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 TBX5Q99593 518 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 MGLLQ99685 303 aa16.04■□□□□ 0.16
VRK3-225ENST00000601912 MCTS1Q9ULC4 181 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 442.3 ms