RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 TMEM54Q969K7 222 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 RASD2Q96D21 266 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF570Q96NI8 536 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 DDOQ99489 341 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 SLCO5A1Q9H2Y9 848 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 TOR3AQ9H497 397 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 SMPD3Q9NY59 655 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 GRHPRQ9UBQ7 328 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 MALT1Q9UDY8 824 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 PRSS50Q9UI38 385 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 ORC6Q9Y5N6 252 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 RELNP78509 3460 aa11.18□□□□□ -0.62
CHMP2A-206ENST00000600118 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 WIPF3A6NGB9 483 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 OR6C65A6NJZ3 312 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 A8MXE2 369 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 H0YJX3 145 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 AHCYL1O43865 530 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZG16O60844 167 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 UPK3AO75631 287 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 SNAP29O95721 258 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 IGHG1P01857 330 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 HIST1H1CP16403 213 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 CDKN2AP42771 156 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 PTDSS1P48651 473 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 CSNK1A1P48729 337 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF133P52736 654 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 MYBPC1Q00872 1141 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 LGALS3BPQ08380 585 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 CDSNQ15517 529 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC25A35Q3KQZ1 300 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZIK1Q3SY52 487 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 PHYHD1Q5SRE7 291 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 TMEM236Q5W0B7 351 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 CARD17Q5XLA6 110 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 FBXW9Q5XUX1 488 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 C12orf73Q69YU5 71 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF474Q6S9Z5 364 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ADCK1Q86TW2 530 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF100Q8IYN0 542 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF610Q8N9Z0 462 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 POMGNT2Q8NAT1 580 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF566Q969W8 418 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 SNX18Q96RF0 628 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 OPN3Q9H1Y3 402 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 COQ3Q9NZJ6 369 aa11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 VSX1Q9NZR4 365 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-206ENST00000600118 ARHGAP21Q5T5U3 1957 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC22A23A1A5C7 686 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 PRSS37A4D1T9 235 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 RPL36A-HNRNPH2H7BZ11 118 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 HMGN1P05114 100 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 NOS3P29474 1203 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 PCYT1AP49585 367 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 EFNB1P98172 346 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 XKRXQ6PP77 449 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 Q6ZT83 130 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 MRGPRGQ86SM5 289 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 GABRG1Q8N1C3 465 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 ZNF808Q8N4W9 903 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 NPEPL1Q8NDH3 523 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 OR4K13Q8NH42 304 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 HRASLS5Q96KN8 279 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 PITX2Q99697 317 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 RASSF4Q9H2L5 321 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 CMC2Q9NRP2 79 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 FAM118AQ9NWS6 357 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 GLTPQ9NZD2 209 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 KLHL21Q9UJP4 597 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 NDRG4Q9ULP0 352 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 MYO18BQ8IUG5 2567 aa11.16□□□□□ -0.62
CHMP2A-206ENST00000600118 NCOA6Q14686 2063 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 OR6C68A6NDL8 312 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 H7C1C5 153 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 XKRYO14609 159 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 SURF4O15260 269 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC16A6O15403 523 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 SLC2A10O95528 541 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 IGHV3-9P01782 118 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 COX5AP20674 150 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 GGT2P36268 569 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 CLRN1P58418 232 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 LCN6P62502 163 aa11.15□□□□□ -0.62
CHMP2A-206ENST00000600118 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms