RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 TBC1D3LB9A6J9 549 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 GSTZ1O43708 216 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-242ENST00000593093 SLC25A12O75746 678 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 TBC1D3HP0C7X1 549 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 PVRP15151 417 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 POU3F4P49335 361 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
CIRBP-242ENST00000593093 METRNLQ641Q3 311 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 TBC1D3CQ6IPX1 549 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 OR2W3Q7Z3T1 314 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 TBC1D3Q8IZP1 549 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-242ENST00000593093 PUSL1Q8N0Z8 303 aaKnown RBP13.03□□□□□ -0.32
CIRBP-242ENST00000593093 ARMC10Q8N2F6 343 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 OR4S1Q8NGB4 309 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 WBP1Q96G27 269 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 GFI1Q99684 422 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 SLC6A7Q99884 636 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 WDR13Q9H1Z4 485 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 SDHAF3Q9NRP4 125 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 ZNF275Q9NSD4 429 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-242ENST00000593093 TMEM74BQ9NUR3 256 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 DEC1Q9P2X7 70 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 SHPKQ9UHJ6 478 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 ADAM29Q9UKF5 820 aa13.03□□□□□ -0.32
CIRBP-242ENST00000593093 C11orf98E9PRG8 122 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 AKAIN1P0CW23 69 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 ADH5P11766 374 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 BDKRB2P30411 391 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 EMDP50402 254 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 EPHA4P54764 986 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.32
CIRBP-242ENST00000593093 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 OR2L3Q8NG85 312 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 OR1J2Q8NGS2 313 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 FAM46BQ96A09 425 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 HAVCR1Q96D42 359 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 ALG12Q9BV10 488 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 FAM96BQ9Y3D0 163 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.32
CIRBP-242ENST00000593093 NID1P14543 1247 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 CNR1P21554 472 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 AVPR2P30518 371 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 PRKXP51817 358 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 PRMT2P55345 433 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.32
CIRBP-242ENST00000593093 SGCGQ13326 291 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.32
CIRBP-242ENST00000593093 SFT2D1Q8WV19 159 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 EPHX3Q9H6B9 360 aa13.02□□□□□ -0.32
CIRBP-242ENST00000593093 A0A1B0GV90 55 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 HPP00738 406 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 HPGDP15428 266 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 SPI1P17947 270 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 NFYBP25208 207 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 ALKBH1Q13686 389 aaKnown RBP13.02□□□□□ -0.33
CIRBP-242ENST00000593093 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 TMED6Q8WW62 240 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 COMMD4Q9H0A8 199 aa13.02□□□□□ -0.33
CIRBP-242ENST00000593093 PARP12Q9H0J9 701 aaKnown RBP13.02□□□□□ -0.33
CIRBP-242ENST00000593093 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.33
CIRBP-242ENST00000593093 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-242ENST00000593093 MRPS23Q9Y3D9 190 aaKnown RBP13.02□□□□□ -0.33
CIRBP-242ENST00000593093 B3GALT2O43825 422 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 TBX19O60806 448 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 AKR7A3O95154 331 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 NGFRP08138 427 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 RAB40ALP0C0E4 278 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 PPP2CBP62714 309 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 TRA2BP62995 288 aaKnown RBP13.01□□□□□ -0.33
CIRBP-242ENST00000593093 PPP2CAP67775 309 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-242ENST00000593093 POU4F2Q12837 409 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 C3orf33Q6P1S2 294 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 TMEM205Q6UW68 189 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF337Q9Y3M9 751 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ADH1AP07327 375 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 OR4E1P0C645 316 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ADRA2CP18825 462 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 MAP3K8P41279 467 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ATP1B3P54709 279 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ARHGAP19Q14CB8 494 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 UBXN2BQ14CS0 331 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 MLC1Q15049 377 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 KLHL26Q53HC5 615 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 PPP1R1CQ8WVI7 109 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 FLRT3Q9NZU0 649 aa13.01□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms