RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 HIF3AQ9Y2N7 669 aa13.69□□□□□ -0.22
LIG3-215ENST00000592690 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
LIG3-215ENST00000592690 ARFGEF3Q5TH69 2177 aa13.69□□□□□ -0.22
LIG3-215ENST00000592690 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 MCIDASD6RGH6 385 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 IGLV1-44P01699 117 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 H1F0P07305 194 aaKnown RBP13.68□□□□□ -0.22
LIG3-215ENST00000592690 CECR9P0C854 216 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 HOXB1P14653 301 aaPredicted RBP13.68□□□□□ -0.22
LIG3-215ENST00000592690 RHCEP18577 417 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 GPR4P46093 362 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 CAPZA2P47755 286 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 FHL1Q13642 323 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 ZNF813Q6ZN06 617 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 MBOAT2Q6ZWT7 520 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 MDP1Q86V88 176 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 OR13C2Q8NGS9 318 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 OR51A7Q8NH64 312 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 SLC7A13Q8TCU3 470 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 PYURFQ96I23 114 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 ZNF347Q96SE7 839 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 FOXB1Q99853 325 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 GSX2Q9BZM3 304 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 ANKRD19PQ9H560 264 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 CXorf56Q9H5V9 222 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 NOX3Q9HBY0 568 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 ZNF701Q9NV72 531 aaPredicted RBP13.68□□□□□ -0.22
LIG3-215ENST00000592690 MOKQ9UQ07 419 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
LIG3-215ENST00000592690 FAM32AQ9Y421 112 aaKnown RBP13.68□□□□□ -0.22
LIG3-215ENST00000592690 ACANP16112 2415 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 EFCAB9A8MZ26 197 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 OVOL3O00110 214 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 CDC42EP2O14613 210 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 IGKV3-15P01624 115 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 CD8AP01732 235 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 IGHG1P01857 330 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 HLA-HP01893 362 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 PAX1P15863 534 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 ATP6V1B2P21281 511 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 CALB2P22676 271 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 CDKN1AP38936 164 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 DAP3P51398 398 aaKnown RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 IDH3GP51553 393 aaPredicted RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 CLRN1P58418 232 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 SPATS1Q496A3 300 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 ALG10Q5BKT4 473 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 FGD3Q5JSP0 725 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 SHEQ5VZ18 495 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 DTX2Q86UW9 622 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 RNF113BQ8IZP6 322 aaKnown RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 SYT14Q8NB59 555 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 NOXO1Q8NFA2 376 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 HTRA1Q92743 480 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 SEPHS2Q99611 448 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 DHRS9Q9BPW9 319 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 TRAF4Q9BUZ4 470 aaPredicted RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 MRPL13Q9BYD1 178 aaKnown RBP13.67□□□□□ -0.22
LIG3-215ENST00000592690 B3GNT2Q9NY97 397 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 ZNF224Q9NZL3 707 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 ATP23Q9Y6H3 246 aa13.67□□□□□ -0.22
LIG3-215ENST00000592690 TRBV4-1A0A0J9YWV2 114 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 A0A1W2PRQ8 180 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 ARHGEF9O43307 516 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 TMCC2O75069 709 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
LIG3-215ENST00000592690 QDPRP09417 244 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 CD99P14209 185 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 CBR1P16152 277 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 ACADSP16219 412 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 TTKP33981 857 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 NAAAQ02083 359 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 NPRL3Q12980 569 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 DGCR6Q14129 220 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 SEC23BQ15437 767 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 HIST3H3Q16695 136 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 C3orf36Q3SXR2 165 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 CYP2R1Q6VVX0 501 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 TMPRSS11FQ6ZWK6 438 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 OAFQ86UD1 273 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 FAM169BQ8N8A8 192 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 HDAC2Q92769 488 aaKnown RBP13.66□□□□□ -0.22
LIG3-215ENST00000592690 MCHR2Q969V1 340 aa13.66□□□□□ -0.22
LIG3-215ENST00000592690 GTPBP3Q969Y2 492 aaKnown RBP13.66□□□□□ -0.22
LIG3-215ENST00000592690 FAM46AQ96IP4 442 aaKnown RBP13.66□□□□□ -0.22
LIG3-215ENST00000592690 DHRS1Q96LJ7 313 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms