RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 GSG1Q2KHT4 349 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 C8orf82Q6P1X6 216 aaPredicted RBP12.03□□□□□ -0.48
APOC1-208ENST00000592535 CLEC2AQ6UVW9 174 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 NUP37Q8NFH4 326 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 OR10H5Q8NGA6 315 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 OR4F15Q8NGB8 312 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 ZNF566Q969W8 418 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 SGTBQ96EQ0 304 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 ZNF224Q9NZL3 707 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 HIVEP2P31629 2446 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 A0A096LNT2 108 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 PIP5K1CO60331 668 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 PDE5AO76074 875 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 BCL10O95999 233 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 F13BP05160 661 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 PGA4P0DJD7 388 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 PGA3P0DJD8 388 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 THRBP10828 461 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 FUT4P22083 530 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 THBS4P35443 961 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 SEC24CP53992 1094 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 SNRPD2P62316 118 aaKnown RBP12.02□□□□□ -0.49
APOC1-208ENST00000592535 LRFN4Q6PJG9 635 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 SPATA21Q7Z572 469 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 VTCN1Q7Z7D3 282 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 NANOS1Q8WY41 292 aaKnown RBP12.02□□□□□ -0.49
APOC1-208ENST00000592535 SLC25A44Q96H78 314 aaPredicted RBP12.02□□□□□ -0.49
APOC1-208ENST00000592535 PRRC1Q96M27 445 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 ZNF75AQ96N20 296 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 ELAC2Q9BQ52 826 aaKnown RBP12.02□□□□□ -0.49
APOC1-208ENST00000592535 ADAM21Q9UKJ8 722 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 MED31Q9Y3C7 131 aa12.02□□□□□ -0.49
APOC1-208ENST00000592535 B9A039 149 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 CXCR6O00574 342 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 DHHO43323 396 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 IGF2P01344 180 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 AQP2P41181 271 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 YAP1P46937 504 aaKnown RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 GIPRP48546 466 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 PTDSS1P48651 473 aaKnown RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 GSK3BP49841 420 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 NUDT2P50583 147 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 DSCR9P59020 149 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
APOC1-208ENST00000592535 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 RUNX1T1Q06455 604 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 ST3GAL3Q11203 375 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 SNTB2Q13425 540 aaKnown RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 EFNB3Q15768 340 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 ANKS4BQ8N8V4 417 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 MOSPD2Q8NHP6 518 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 LIPHQ8WWY8 451 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 ASB10Q8WXI3 467 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 LZICQ8WZA0 190 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 FAM168AQ92567 244 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 HOPXQ9BPY8 73 aaPredicted RBP12.01□□□□□ -0.49
APOC1-208ENST00000592535 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 ZNF442Q9H7R0 627 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 EFCAB1Q9HAE3 211 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 RHCGQ9UBD6 479 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
APOC1-208ENST00000592535 A0A1W2PRG6 482 aa12□□□□□ -0.49
APOC1-208ENST00000592535 MCIDASD6RGH6 385 aa12□□□□□ -0.49
APOC1-208ENST00000592535 J3KTA2 159 aa12□□□□□ -0.49
APOC1-208ENST00000592535 GSTA4O15217 222 aa12□□□□□ -0.49
APOC1-208ENST00000592535 GPRIN2O60269 458 aa12□□□□□ -0.49
APOC1-208ENST00000592535 UBL3O95164 117 aa12□□□□□ -0.49
APOC1-208ENST00000592535 RAB36O95755 333 aa12□□□□□ -0.49
APOC1-208ENST00000592535 ZNF682O95780 498 aa12□□□□□ -0.49
APOC1-208ENST00000592535 IGHG1P01857 330 aa12□□□□□ -0.49
APOC1-208ENST00000592535 QDPRP09417 244 aa12□□□□□ -0.49
APOC1-208ENST00000592535 TSPAN19P0C672 248 aa12□□□□□ -0.49
APOC1-208ENST00000592535 PATE4P0C8F1 98 aa12□□□□□ -0.49
APOC1-208ENST00000592535 NPR2P20594 1047 aa12□□□□□ -0.49
APOC1-208ENST00000592535 CLRN1P58418 232 aa12□□□□□ -0.49
APOC1-208ENST00000592535 RAB1AP62820 205 aa12□□□□□ -0.49
APOC1-208ENST00000592535 MYBPC1Q00872 1141 aa12□□□□□ -0.49
APOC1-208ENST00000592535 DAG1Q14118 895 aa12□□□□□ -0.49
APOC1-208ENST00000592535 KRT80Q6KB66 452 aa12□□□□□ -0.49
APOC1-208ENST00000592535 HACD2Q6Y1H2 254 aa12□□□□□ -0.49
APOC1-208ENST00000592535 CBLL1Q75N03 491 aa12□□□□□ -0.49
APOC1-208ENST00000592535 PIWIL3Q7Z3Z3 882 aaKnown RBP12□□□□□ -0.49
APOC1-208ENST00000592535 SVOPLQ8N434 492 aa12□□□□□ -0.49
APOC1-208ENST00000592535 SLC22A24Q8N4F4 322 aa12□□□□□ -0.49
APOC1-208ENST00000592535 NOXO1Q8NFA2 376 aa12□□□□□ -0.49
APOC1-208ENST00000592535 C10orf105Q8TEF2 133 aa12□□□□□ -0.49
APOC1-208ENST00000592535 ZNF347Q96SE7 839 aa12□□□□□ -0.49
APOC1-208ENST00000592535 VRK1Q99986 396 aaPredicted RBP12□□□□□ -0.49
APOC1-208ENST00000592535 FAM107BQ9H098 131 aa12□□□□□ -0.49
APOC1-208ENST00000592535 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms