RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 OR10H5Q8NGA6 315 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 OR6N1Q8NGY5 312 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 SGTBQ96EQ0 304 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 SLC25A44Q96H78 314 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-239ENST00000592467 PRRC1Q96M27 445 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 REG4Q9BYZ8 158 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 B3GAT2Q9NPZ5 323 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 YLPM1P49750 1951 aaKnown RBP17.49■□□□□ 0.39
CIRBP-239ENST00000592467 IGHV4-30-2A0A087WSY4 118 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 IGHV2OR16-5A0A0B4J2B6 119 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 CXCR6O00574 342 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 PRSS23O95084 383 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 UMPSP11172 480 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 B4GALT1P15291 398 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF14P17017 642 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-239ENST00000592467 NANOGNBQ7Z5D8 188 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 FGFBP3Q8TAT2 258 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 MRPL13Q9BYD1 178 aaKnown RBP17.48■□□□□ 0.39
CIRBP-239ENST00000592467 POFUT2Q9Y2G5 429 aa17.48■□□□□ 0.39
CIRBP-239ENST00000592467 CHD3Q12873 2000 aaKnown RBP17.47■□□□□ 0.39
CIRBP-239ENST00000592467 BLOC1S5-TXNDC5H3BN57 136 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 J3KTA2 159 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 PDE5AO76074 875 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 HIST1H2ABP04908 130 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 F13BP05160 661 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 LSP1P33241 339 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 AQP2P41181 271 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 NUDT2P50583 147 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 FHL1Q13642 323 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 EFNB3Q15768 340 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 HIST3H2AQ7L7L0 130 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 OFCC1Q8IZS5 231 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 OR4F15Q8NGB8 312 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 MOSPD2Q8NHP6 518 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 ASB10Q8WXI3 467 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 HIST1H2ACQ93077 130 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF566Q969W8 418 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 FBXO17Q96EF6 278 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 MS4A3Q96HJ5 214 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 MED31Q9Y3C7 131 aa17.47■□□□□ 0.39
CIRBP-239ENST00000592467 PRDX6P30041 224 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 THBS4P35443 961 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 SERPINF1P36955 418 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 YAP1P46937 504 aaKnown RBP17.46■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF133P52736 654 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-239ENST00000592467 NUDT6P53370 316 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 GYS2P54840 703 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 CHRNB3Q05901 458 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 ST3GAL3Q11203 375 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 NPRL3Q12980 569 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 RAB35Q15286 201 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 GSG1Q2KHT4 349 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 ARMC4Q5T2S8 1044 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 SKA3Q8IX90 412 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 KCNS3Q9BQ31 491 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 PLK3Q9H4B4 646 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF442Q9H7R0 627 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 RHCGQ9UBD6 479 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 HIF3AQ9Y2N7 669 aa17.46■□□□□ 0.39
CIRBP-239ENST00000592467 TMEM129A0AVI4 362 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 DHHO43323 396 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 LY6HO94772 140 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 BCL10O95999 233 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 SERPINA1P01009 418 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 IGFBP1P08833 259 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-239ENST00000592467 OR4A8P0C604 315 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 ZNF35P13682 527 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 MAKP20794 623 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 CAPZA2P47755 286 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 EFNA4P52798 201 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 PSME3P61289 254 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 PIGFQ07326 219 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 MSMPQ1L6U9 139 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 PIWIL3Q7Z3Z3 882 aaKnown RBP17.45■□□□□ 0.38
CIRBP-239ENST00000592467 ZNF584Q8IVC4 421 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 ZNF525Q8N782 197 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 LRRC75AQ8NAA5 344 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 RBM15BQ8NDT2 890 aaKnown RBP17.45■□□□□ 0.38
CIRBP-239ENST00000592467 NANOS1Q8WY41 292 aaKnown RBP17.45■□□□□ 0.38
CIRBP-239ENST00000592467 LZICQ8WZA0 190 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 NMD3Q96D46 503 aaKnown RBP17.45■□□□□ 0.38
CIRBP-239ENST00000592467 CMTM5Q96DZ9 223 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 HSH2DQ96JZ2 352 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 SORCS2Q96PQ0 1159 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 ZNF347Q96SE7 839 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 FAM107BQ9H098 131 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 TMEM38BQ9NVV0 291 aa17.45■□□□□ 0.38
CIRBP-239ENST00000592467 ABCA1O95477 2261 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 GMNCA6NCL1 334 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 NPIPB13A6NJU9 1138 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 NPIPB4C9JG80 1138 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 TRMUO75648 421 aaKnown RBP17.44■□□□□ 0.38
CIRBP-239ENST00000592467 ZNF682O95780 498 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 F12P00748 615 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-239ENST00000592467 IFNW1P05000 195 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 QDPRP09417 244 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 PATE4P0C8F1 98 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 CD79AP11912 226 aa17.44■□□□□ 0.38
CIRBP-239ENST00000592467 NCK1P16333 377 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms