RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ACADSP16219 412 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 GPR4P46093 362 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 SLC9A3P48764 834 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 FABP6P51161 128 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 CTXN1P60606 82 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 RPS4XP62701 263 aaKnown RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 NKX6-1P78426 367 aaPredicted RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 ANKDD1AQ495B1 522 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 PHYHD1Q5SRE7 291 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 PODNL1Q6PEZ8 512 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 TBPL2Q6SJ96 375 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 DHFR2Q86XF0 187 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 MEX3DQ86XN8 651 aaKnown RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 FBXL14Q8N1E6 418 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 SYT14Q8NB59 555 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 LIPHQ8WWY8 451 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 NEUROG1Q92886 237 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 TRMT61AQ96FX7 289 aaKnown RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 PERPQ96FX8 193 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 SLC38A2Q96QD8 506 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 RBP7Q96R05 134 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 TNFRSF13CQ96RJ3 184 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 ZNF347Q96SE7 839 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 SEPHS2Q99611 448 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 FOXB1Q99853 325 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 THTPAQ9BU02 230 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 TRIM15Q9C019 465 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 KCNN2Q9H2S1 579 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 MUC13Q9H3R2 512 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 RNF121Q9H920 327 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 NDUFAF4Q9P032 175 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 ACTR3BQ9P1U1 418 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 PRPF19Q9UMS4 504 aaKnown RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 TRAV27A0A087WT01 109 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 A0A1W2PRQ8 180 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 DHHO43323 396 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 TRMUO75648 421 aaKnown RBP8.8□□□□□ -1
BRCA1-227ENST00000591849 PDE5AO76074 875 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 RAB36O95755 333 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 B4GALT1P15291 398 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 CBR1P16152 277 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 MAKP20794 623 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 ARR3P36575 388 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 ACVR1BP36896 505 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 IFNGR2P38484 337 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 RPL27P61353 136 aaKnown RBP8.8□□□□□ -1
BRCA1-227ENST00000591849 VLDLRP98155 873 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 MYBPC1Q00872 1141 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 CHRNB3Q05901 458 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 PIGFQ07326 219 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 CD47Q08722 323 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 NPRL3Q12980 569 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 DGCR6Q14129 220 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 TESK1Q15569 626 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 ZBED5Q49AG3 693 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 MTX3Q5HYI7 312 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 AGAP6Q5VW22 663 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 SHEQ5VZ18 495 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 NHLRC1Q6VVB1 395 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 PIWIL3Q7Z3Z3 882 aaKnown RBP8.8□□□□□ -1
BRCA1-227ENST00000591849 IGFN1Q86VF2 1251 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 ZDHHC21Q8IVQ6 265 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 FAM86B1Q8N7N1 296 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 OR13C2Q8NGS9 318 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 TMEM54Q969K7 222 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 ZNF837Q96EG3 531 aaPredicted RBP8.8□□□□□ -1
BRCA1-227ENST00000591849 BOD1Q96IK1 185 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 C7orf34Q96L11 122 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 TXNIPQ9H3M7 391 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 MAN2C1Q9NTJ4 1040 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 MOKQ9UQ07 419 aa8.8□□□□□ -1
BRCA1-227ENST00000591849 IGHV1-18A0A0C4DH31 117 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TRBV4-1A0A0J9YWV2 114 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 UNC119BA6NIH7 251 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 A6NIZ1 184 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 SHISA9B4DS77 424 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 XKRYO14609 159 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 OR10H3O60404 316 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TMCC2O75069 709 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 UBOX5O94941 541 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 HLA-HP01893 362 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 PGA4P0DJD7 388 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 PGA3P0DJD8 388 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 OR8G3PP0DMU2 310 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 T-ENOLP0DO92 83 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 BMP4P12644 408 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 IDH3GP51553 393 aaPredicted RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 ATP5J2P56134 94 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 RAP1BP61224 184 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 RAP1AP62834 184 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
BRCA1-227ENST00000591849 SPOCK1Q08629 439 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TRIM25Q14258 630 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 SGCAQ16586 387 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 FXNQ16595 210 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 GSG1Q2KHT4 349 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 DNAL1Q4LDG9 190 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 FAM98BQ52LJ0 330 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 FAM205BPQ63HN1 556 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms