RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 IGHG1P01857 330 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 PGA4P0DJD7 388 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 PGA3P0DJD8 388 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 NR2C1P13056 603 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 RUNX1T1Q06455 604 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 CDK5R2Q13319 367 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 AADACL4Q5VUY2 407 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 PLBD1Q6P4A8 553 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 LEG1Q6P5S2 330 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 CXXC5Q7LFL8 322 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 CPOQ8IVL8 374 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 SDR9C7Q8NEX9 313 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 HDAC2Q92769 488 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 ZNF566Q969W8 418 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 INTS12Q96CB8 462 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 LRR1Q96L50 414 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 ZFP3Q96NJ6 502 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 EMC6Q9BV81 110 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 NMNAT2Q9BZQ4 307 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 HINT3Q9NQE9 182 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 NOSIPQ9Y314 301 aaKnown RBP13.46□□□□□ -0.25
DDX39A-211ENST00000590239 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.25
DDX39A-211ENST00000590239 SH3D21A4FU49 640 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 OR6C68A6NDL8 312 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 OR6C65A6NJZ3 312 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 KDM4EB2RXH2 506 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-211ENST00000590239 SLC43A1O75387 559 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 WBP4O75554 376 aaKnown RBP13.45□□□□□ -0.26
DDX39A-211ENST00000590239 CRHP06850 196 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 AGTR1P30556 359 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 TIMP3P35625 211 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 CSNK2BP67870 215 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 GUSBP1Q15486 140 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 HIST3H3Q16695 136 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 EIF2S3LQ2VIR3 472 aaKnown RBP13.45□□□□□ -0.26
DDX39A-211ENST00000590239 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 B3GNT6Q6ZMB0 384 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 TUSC5Q8IXB3 177 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 C9orf106Q8NAJ2 232 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 CYB561A3Q8NBI2 242 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 NOXO1Q8NFA2 376 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 APH1BQ8WW43 257 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 PTP4A1Q93096 173 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 RFKQ969G6 155 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 ZNF582Q96NG8 517 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-211ENST00000590239 RBP7Q96R05 134 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 UBAP1Q9NZ09 502 aa13.45□□□□□ -0.26
DDX39A-211ENST00000590239 FAM183AA6NL82 134 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SNTNA6NMZ2 147 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 PRODHO43272 600 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 ENTPD6O75354 484 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 MRPL33O75394 65 aaKnown RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 NTF4P34130 210 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SELENOPP49908 381 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CASP6P55212 293 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CLRN1P58418 232 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CXCR4P61073 352 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 TMED1Q13445 227 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CAMK2DQ13557 499 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SOWAHCQ53LP3 525 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 THEM4Q5T1C6 240 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 NIPAL3Q6P499 406 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SEM1Q6ZVN7 128 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 FAM214BQ7L5A3 538 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 C20orf196Q8IYI0 205 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SYT14Q8NB59 555 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 OR2T4Q8NH00 348 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CNIH3Q8TBE1 160 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 TMEM54Q969K7 222 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 OTULINQ96BN8 352 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 ZNF775Q96BV0 537 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 SYT4Q9H2B2 425 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 H2AFY2Q9P0M6 372 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-211ENST00000590239 CLEC4AQ9UMR7 237 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 FKBP7Q9Y680 259 aa13.44□□□□□ -0.26
DDX39A-211ENST00000590239 H7C1C5 153 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 IL2RAP01589 272 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 GLI4P10075 376 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 SPI1P17947 270 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 SLC2A5P22732 501 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 CRABP1P29762 137 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 ZNF133P52736 654 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-211ENST00000590239 LCN6P62502 163 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 LGALS3BPQ08380 585 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 LAIR2Q6ISS4 152 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 DNM1P34Q6PK57 102 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms