RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TFAP2E	Q6VUC0	442 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	NDUFAF7	Q7L592	441 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	OVCH2	Q7RTZ1	564 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	PHC2	Q8IXK0	858 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	DEFB124	Q8NES8	71 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR10G3	Q8NGC4	313 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR52L1	Q8NGH7	329 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	SLC22A8	Q8TCC7	542 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	ST8SIA4	Q92187	359 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR2M2	Q96R28	347 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	LDAH	Q9H6V9	325 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	IFT46	Q9NQC8	304 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	TAS2R16	Q9NYV7	291 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	FARSA	Q9Y285	508 aa	Known RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	NSG1	A0A0A6YYJ2	146 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	hCG_1807616	A0A1W2PRN6	198 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	TERT	O14746	1132 aa	Known RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	SLC19A2	O60779	497 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	NBL1	P41271	181 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	SCRN3	Q0VDG4	424 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	POU4F3	Q15319	338 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF791	Q3KP31	576 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	RTL4	Q6ZR62	310 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	PHF21A	Q96BD5	680 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	SPACA9	Q96E40	222 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF160	Q9HCG1	818 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	HINT3	Q9NQE9	182 aa	Known RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	MUC6	Q6W4X9	2439 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	SMLR1	H3BR10	107 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	PRODH	O43272	600 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	CDC40	O60508	579 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	ITGA10	O75578	1167 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	SLC6A1	P30531	599 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	SOX3	P41225	446 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	RPS4X	P62701	263 aa	Known RBP	13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	FLI1	Q01543	452 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	C17orf67	Q0P5P2	114 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	TMEM164	Q5U3C3	297 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR5M10	Q6IEU7	315 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR5T2	Q8NGG2	359 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	LIPH	Q8WWY8	451 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	NXPE2	Q96DL1	559 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	KLHL15	Q96M94	604 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	MRPS18A	Q9NVS2	196 aa	Known RBP	13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	RDH8	Q9NYR8	311 aa		13.93	□□□□□ -0.18
DDX39A-209	ENST00000589318	CIB4	A0PJX0	185 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	IRGM	A1A4Y4	181 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318		H0YC42	278 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	NUDT14	O95848	222 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	PEPD	P12955	493 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	FGF9	P31371	208 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	NUP62	P37198	522 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	EVX1	P49640	407 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	FOXK2	Q01167	660 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	LTB	Q06643	244 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	DOC2B	Q14184	412 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	SSPN	Q14714	243 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF74	Q16587	644 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	CNIH2	Q6PI25	160 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	ARMC10	Q8N2F6	343 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	SLC43A2	Q8N370	569 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	DTX3	Q8N9I9	347 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	BBS1	Q8NFJ9	593 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	DACT3	Q96B18	629 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	KTI12	Q96EK9	354 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	MOGAT1	Q96PD6	335 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	IFT27	Q9BW83	186 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	TEX12	Q9BXU0	123 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	CMC2	Q9NRP2	79 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	TAS2R10	Q9NYW0	307 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	PRELID3B	Q9Y3B1	194 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318		A0A1W2PPL8	197 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	ANKUB1	A6NFN9	424 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	PPP1R3D	O95685	299 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	LALBA	P00709	142 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	GP1BB	P13224	206 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	APEX1	P27695	318 aa	Known RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	OTX2	P32243	289 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318		Q0VFX4	171 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	FCN2	Q15485	313 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	GXYLT1	Q4G148	440 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	FCRLB	Q6BAA4	426 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	TRIL	Q7L0X0	811 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	UBE2J2	Q8N2K1	259 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	SCMH1	Q96GD3	660 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	NPAS1	Q99742	590 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	PRRX2	Q99811	253 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	EMC3	Q9P0I2	261 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	COPZ2	Q9P299	210 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF337	Q9Y3M9	751 aa		13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX39A-209	ENST00000589318	IGLV3-32	A0A0A0MS00	114 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	SPAAR	A0A1B0GVQ0	90 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	FAM183A	A6NL82	134 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	MCIDAS	D6RGH6	385 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	TNFSF15	O95150	251 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	NDUFB2	O95178	105 aa		13.91	□□□□□ -0.18
DDX39A-209	ENST00000589318	ASAH2B	P0C7U1	165 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms