RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NRARPQ7Z6K4 114 aa9□□□□□ -0.97
VPS25-202ENST00000589219 PPP1R3BQ86XI6 285 aa9□□□□□ -0.97
VPS25-202ENST00000589219 CDC20BQ86Y33 519 aa9□□□□□ -0.97
VPS25-202ENST00000589219 SPACA3Q8IXA5 215 aa9□□□□□ -0.97
VPS25-202ENST00000589219 TIGD4Q8IY51 512 aa9□□□□□ -0.97
VPS25-202ENST00000589219 Q8N402 240 aa9□□□□□ -0.97
VPS25-202ENST00000589219 APCDD1LQ8NCL9 501 aa9□□□□□ -0.97
VPS25-202ENST00000589219 OR51L1Q8NGJ5 315 aa9□□□□□ -0.97
VPS25-202ENST00000589219 ENKURQ8TC29 256 aa9□□□□□ -0.97
VPS25-202ENST00000589219 GPR119Q8TDV5 335 aa9□□□□□ -0.97
VPS25-202ENST00000589219 TTC9Q92623 222 aa9□□□□□ -0.97
VPS25-202ENST00000589219 HPS1Q92902 700 aa9□□□□□ -0.97
VPS25-202ENST00000589219 HGDQ93099 445 aa9□□□□□ -0.97
VPS25-202ENST00000589219 ZC3HAV1LQ96H79 300 aaKnown RBP9□□□□□ -0.97
VPS25-202ENST00000589219 KLHL15Q96M94 604 aa9□□□□□ -0.97
VPS25-202ENST00000589219 CMTM3Q96MX0 182 aa9□□□□□ -0.97
VPS25-202ENST00000589219 AGAP4Q96P64 663 aa9□□□□□ -0.97
VPS25-202ENST00000589219 BBC3Q96PG8 261 aaPredicted RBP9□□□□□ -0.97
VPS25-202ENST00000589219 PTDSS2Q9BVG9 487 aa9□□□□□ -0.97
VPS25-202ENST00000589219 RTN4RQ9BZR6 473 aa9□□□□□ -0.97
VPS25-202ENST00000589219 MARCH7Q9H992 704 aa9□□□□□ -0.97
VPS25-202ENST00000589219 CYSLTR2Q9NS75 346 aa9□□□□□ -0.97
VPS25-202ENST00000589219 EXTL2Q9UBQ6 330 aa9□□□□□ -0.97
VPS25-202ENST00000589219 FKBP7Q9Y680 259 aa9□□□□□ -0.97
VPS25-202ENST00000589219 SCN2AQ99250 2005 aa9□□□□□ -0.97
VPS25-202ENST00000589219 TRBV2A0A0J9YWF9 115 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 NPIPB13A6NJU9 1138 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 NPIPB4C9JG80 1138 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ADAM10O14672 748 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ITGA10O75578 1167 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZNF432O94892 652 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 OR6A2O95222 327 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 F13BP05160 661 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 KRT8P05787 483 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 FGF5P12034 268 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 NPR2P20594 1047 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 MSX1P28360 303 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 NR4A2P43354 598 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 RFX2P48378 723 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 INPP1P49441 399 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 MAP2K6P52564 334 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TPTEP56180 551 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TMPRSS3P57727 454 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 OR2B6P58173 313 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 RPL27P61353 136 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 CXADRP78310 365 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 EGR3Q06889 387 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 C17orf67Q0P5P2 114 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TAB1Q15750 504 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TOMM34Q15785 309 aaPredicted RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZNF684Q5T5D7 378 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 FAM205BPQ63HN1 556 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 PWWP2BQ6NUJ5 590 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TMEM205Q6UW68 189 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 UNQ9370/PRO34162Q6UXP9 181 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 CPEB2Q7Z5Q1 589 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 LSRQ86X29 649 aaPredicted RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 RDH10Q8IZV5 341 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 CELF2-AS1Q8N7Q2 184 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 SCAIQ8N9R8 606 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZBTB8BQ8NAP8 495 aaPredicted RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 IL17RDQ8NFM7 739 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZNF519Q8TB69 540 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 TRMT10AQ8TBZ6 339 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 SLC22A8Q8TCC7 542 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 KCNE4Q8WWG9 221 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 INTS14Q96SY0 518 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 SPSB2Q99619 263 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 CRB3Q9BUF7 120 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 MRI1Q9BV20 369 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZCCHC4Q9H5U6 513 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 WDR76Q9H967 626 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 WDR54Q9H977 334 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 RYDENQ9NUL5 291 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 MRPL39Q9NYK5 338 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 VSX1Q9NZR4 365 aaPredicted RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 RASD1Q9Y272 281 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 ZNF281Q9Y2X9 895 aa8.99□□□□□ -0.97
VPS25-202ENST00000589219 SMG1Q96Q15 3661 aaKnown RBP8.99□□□□□ -0.97
VPS25-202ENST00000589219 IGLV3-32A0A0A0MS00 114 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 A6NIZ1 184 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 D6RAR5 112 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ETV2O00321 342 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 DVL2O14641 736 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ZNF208O43345 1280 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 SSX4O60224 188 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 FZD7O75084 574 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ZFAND5O76080 213 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 TIAF1O95411 115 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ABHD16AO95870 558 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 PRKCAP17252 672 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ELK1P19419 428 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 APOBEC1P41238 236 aaKnown RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 RAP1BP61224 184 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 RAP1AP62834 184 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 IL11RAQ14626 422 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 PYHIN1Q6K0P9 492 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 DNM1P34Q6PK57 102 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 NR2C2APQ86WQ0 139 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms