RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 FAM183AA6NL82 134 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 M0R3G1 203 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 IL2RAP01589 272 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 NR2C1P13056 603 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 NTF4P34130 210 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 CDKN2AP42771 156 aaKnown RBP20.09■□□□□ 0.81
ACTN4-210ENST00000588618 CRMP1Q14194 572 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 CARD17Q5XLA6 110 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 CYB561A3Q8NBI2 242 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 SLC37A3Q8NCC5 494 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 HCAR1Q9BXC0 346 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 FN3KQ9H479 309 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 HINT3Q9NQE9 182 aaKnown RBP20.09■□□□□ 0.81
ACTN4-210ENST00000588618 H2AFY2Q9P0M6 372 aaPredicted RBP20.09■□□□□ 0.81
ACTN4-210ENST00000588618 EMC9Q9Y3B6 208 aa20.09■□□□□ 0.81
ACTN4-210ENST00000588618 PRSS37A4D1T9 235 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 MBD3L4A6NDZ8 208 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-210ENST00000588618 MBD3L3A6NE82 208 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-210ENST00000588618 MBD3L5A6NJ08 208 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-210ENST00000588618 H7C1C5 153 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 LCN6P62502 163 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 ITGADQ13349 1161 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 GCNT2Q8N0V5 402 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 C9orf106Q8NAJ2 232 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 SYT14Q8NB59 555 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 NPEPL1Q8NDH3 523 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 MBD3L2Q8NHZ7 208 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-210ENST00000588618 TMEM45BQ96B21 275 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 LRR1Q96L50 414 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 Q96MT0 163 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 MED20Q9H944 212 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 CLN6Q9NWW5 311 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 FAM215AQ9Y5M1 114 aa20.08■□□□□ 0.81
ACTN4-210ENST00000588618 TRGV8A0A0C4DH27 118 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 TRMUO75648 421 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SELENOPP49908 381 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SNRPGP62308 76 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 CDK5R2Q13319 367 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SMN1Q16637 294 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 RTL6Q6ICC9 239 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 PLBD1Q6P4A8 553 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 CXXC5Q7LFL8 322 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 OR6N1Q8NGY5 312 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 INTS12Q96CB8 462 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 RBP7Q96R05 134 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SYT4Q9H2B2 425 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 OR6C68A6NDL8 312 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 EIF4E1BA6NMX2 242 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SNTNA6NMZ2 147 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SS18L1O75177 396 aaPredicted RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SLC43A1O75387 559 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 AGTR1P30556 359 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 EIF2S3LQ2VIR3 472 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 CPOQ8IVL8 374 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 CNEP1R1Q8N9A8 125 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 NOXO1Q8NFA2 376 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 BBS1Q8NFJ9 593 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 FNDC8Q8TC99 324 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 HDAC2Q92769 488 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 OR2M2Q96R28 347 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 SNX18Q96RF0 628 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 ALG12Q9BV10 488 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 RPRD1BQ9NQG5 326 aaKnown RBP20.07■□□□□ 0.8
ACTN4-210ENST00000588618 DNAJC27Q9NZQ0 273 aa20.07■□□□□ 0.8
ACTN4-210ENST00000588618 KMT2BQ9UMN6 2715 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-210ENST00000588618 CENPBD1B2RD01 187 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 AHCYL1O43865 530 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 TIMP3P35625 211 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 CSNK1A1P48729 337 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 MEDAGQ5VYS4 303 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 FAM214BQ7L5A3 538 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 ZNF100Q8IYN0 542 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 FAM26EQ8N5C1 309 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 PTP4A1Q93096 173 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 ZFP3Q96NJ6 502 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 KCNK17Q96T54 332 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 TTYH2Q9BSA4 534 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 RERGLQ9H628 205 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 POLEQ07864 2286 aa20.06■□□□□ 0.8
ACTN4-210ENST00000588618 KRT33AO76009 404 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 PGA4P0DJD7 388 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 PGA3P0DJD8 388 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 CLUP10909 449 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 FMO3P31513 532 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 KLHL12Q53G59 568 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 DNM1P34Q6PK57 102 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 UGT2A3Q6UWM9 527 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 RPRMLQ8N4K4 120 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 APH1AQ96BI3 265 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 BBC3Q96PG8 261 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-210ENST00000588618 VSX1Q9NZR4 365 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-210ENST00000588618 OSGIN2Q9Y236 505 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 SLC22A23A1A5C7 686 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 ENTPD6O75354 484 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 ZNF432O94892 652 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 CRABP1P29762 137 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 RPS7P62081 194 aaKnown RBP20.05■□□□□ 0.8
ACTN4-210ENST00000588618 SIRPAP78324 504 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 AADACL4Q5VUY2 407 aa20.05■□□□□ 0.8
ACTN4-210ENST00000588618 NXNL2Q5VZ03 156 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms