RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RELTQ969Z4 430 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 DGCR14Q96DF8 476 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 ZMYND19Q96E35 227 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 INTS14Q96SY0 518 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TEAD3Q99594 435 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MGLLQ99685 303 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SMAD5Q99717 465 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 ALG8Q9BVK2 526 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SF3B5Q9BWJ5 86 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 CDADC1Q9BWV3 514 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SYT4Q9H2B2 425 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MED20Q9H944 212 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 FANCFQ9NPI8 374 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 DEPPQ9NTK1 212 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MRPS18AQ9NVS2 196 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 HAO2Q9NYQ3 351 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TAS2R5Q9NYW4 299 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 KLHL9Q9P2J3 617 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 DKK4Q9UBT3 224 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 EXOGQ9Y2C4 368 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 CAB39Q9Y376 341 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 VPS13AQ96RL7 3174 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 PHF3Q92576 2039 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 FAM186AA6NE01 2351 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR6C68A6NDL8 312 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 A6NHS1 94 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR6C65A6NJZ3 312 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 H7C1C5 153 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 AIREO43918 545 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 CXCL13O43927 109 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ZIC3O60481 467 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC16A7O60669 478 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 FZD7O75084 574 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC43A1O75387 559 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 KHDRBS3O75525 346 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 CEACAM4O75871 244 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SEC14L2O76054 403 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 APOL3O95236 402 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SERPINA3P01011 423 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 IGHA1P01876 353 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OPN1LWP04000 364 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 KRT8P05787 483 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 HTR1AP08908 422 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 CD36P16671 472 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SPINK2P20155 84 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 IL11P20809 199 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 PCMT1P22061 227 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC2A5P22732 501 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 C21orf33P30042 268 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 SOX6P35712 828 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 MAP2K4P45985 399 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 CSNK1A1P48729 337 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 GBX2P52951 348 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 CLDN17P56750 224 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 LCN6P62502 163 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ADAM8P78325 824 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 EFNB1P98172 346 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 BDH1Q02338 343 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SRYQ05066 204 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 LTBQ06643 244 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SRSF6Q13247 344 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 GALEQ14376 348 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 RNPS1Q15287 305 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 ZNF239Q16600 458 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 TSTQ16762 297 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 HYAL4Q2M3T9 481 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 THEM4Q5T1C6 240 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 C1QL3Q5VWW1 255 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 XAF1Q6GPH4 301 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 LAIR2Q6ISS4 152 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 FAM180AQ6UWF9 173 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 IGFL2Q6UWQ7 119 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 B3GNT6Q6ZMB0 384 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 PLEKHG7Q6ZR37 379 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ASB18Q6ZVZ8 466 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 FCRLAQ7L513 359 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC16A9Q7RTY1 509 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ABHD12BQ7Z5M8 362 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 SPACA3Q8IXA5 215 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 GPR137CQ8N3F9 429 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 NANOGP1Q8N7R0 232 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 LRRC75AQ8NAA5 344 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ZNF511Q8NB15 262 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 NPEPL1Q8NDH3 523 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR4F15Q8NGB8 312 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR2AJ1Q8NGZ0 328 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR6X1Q8NH79 312 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 OR10D3Q8NH80 312 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 NEIL3Q8TAT5 605 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ZNF519Q8TB69 540 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ASB17Q8WXJ9 295 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 THRSPQ92748 146 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SARAFQ96BY9 339 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 INTS12Q96CB8 462 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 ISOC1Q96CN7 298 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC25A44Q96H78 314 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 COG8Q96MW5 612 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 UBL7Q96S82 380 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 TSC22D3Q99576 134 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms