RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DND1Q8IYX4 353 aaKnown RBP20.42■□□□□ 0.86
CCDC47-204ENST00000582252 OR6V1Q8N148 313 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 SNRNP27Q8WVK2 155 aaKnown RBP20.42■□□□□ 0.86
CCDC47-204ENST00000582252 NXPE2Q96DL1 559 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 TTYH2Q9BSA4 534 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 MARCH7Q9H992 704 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 VSX1Q9NZR4 365 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-204ENST00000582252 VDAC3Q9Y277 283 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 CPAMD8Q8IZJ3 1885 aa20.42■□□□□ 0.86
CCDC47-204ENST00000582252 TRAV1-2A0A0B4J238 106 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 TMCC2O75069 709 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 NCR1O76036 304 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 DLGAP3O95886 979 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 KRT8P05787 483 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 ZNF79Q15937 498 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 ZMAT1Q5H9K5 638 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 PM20D2Q8IYS1 436 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 A0A1W2PNU3 283 aaPredicted RBP20.41■□□□□ 0.86
CCDC47-204ENST00000582252 NPIPB13A6NJU9 1138 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 NPIPB4C9JG80 1138 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 KLF7O75840 302 aaPredicted RBP20.41■□□□□ 0.86
CCDC47-204ENST00000582252 PLGP00747 810 aaPredicted RBP20.41■□□□□ 0.86
CCDC47-204ENST00000582252 COX6A1P12074 109 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 PTGDSP41222 190 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 DAP3P51398 398 aaKnown RBP20.41■□□□□ 0.86
CCDC47-204ENST00000582252 EGR3Q06889 387 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 PUDPQ08623 228 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 FAM205BPQ63HN1 556 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 LYPD4Q6UWN0 246 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 ARSKQ6UWY0 536 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 OR6N2Q8NGY6 317 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 RPS4Y2Q8TD47 263 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 DNAJA3Q96EY1 480 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 IMMP1LQ96LU5 166 aa20.41■□□□□ 0.86
CCDC47-204ENST00000582252 PMS2P1A4D2B8 440 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 GFRA3O60609 400 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 ITGA10O75578 1167 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 WISP1O95388 367 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 CASP3P42574 277 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 SCN1BQ07699 218 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 PLPPR5Q32ZL2 321 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 ZNF684Q5T5D7 378 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 IDNKQ5T6J7 187 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 TMEM81Q6P7N7 255 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 H1FNTQ75WM6 255 aaPredicted RBP20.4■□□□□ 0.86
CCDC47-204ENST00000582252 PTGES2Q9H7Z7 377 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 C14orf119Q9NWQ9 140 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 B9D1Q9UPM9 204 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 HS3ST3B1Q9Y662 390 aa20.4■□□□□ 0.86
CCDC47-204ENST00000582252 ZNF879B4DU55 563 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 C9orf172C9J069 976 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 DCTN6O00399 190 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 MAGEB4O15481 346 aaPredicted RBP20.39■□□□□ 0.86
CCDC47-204ENST00000582252 HPGDSO60760 199 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 TFPIP10646 304 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 RAB3BP20337 219 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 FKBP2P26885 142 aaKnown RBP20.39■□□□□ 0.86
CCDC47-204ENST00000582252 CRABP1P29762 137 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 OR7A5Q15622 319 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 PYDC2Q56P42 97 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 YIF1BQ5BJH7 314 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 BICRALQ6AI39 1079 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 DNM1P34Q6PK57 102 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 YIPF7Q8N8F6 280 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 NLGN4YQ8NFZ3 816 aaPredicted RBP20.39■□□□□ 0.86
CCDC47-204ENST00000582252 OR4K17Q8NGC6 315 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 MFRPQ9BY79 579 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 B3GNT4Q9C0J1 378 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 CHST11Q9NPF2 352 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 ALKBH4Q9NXW9 302 aa20.39■□□□□ 0.86
CCDC47-204ENST00000582252 CDV3Q9UKY7 258 aaKnown RBP20.39■□□□□ 0.86
CCDC47-204ENST00000582252 NSG1A0A0A6YYJ2 146 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 CENPBD1B2RD01 187 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 DVL2O14641 736 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 UCHL1P09936 223 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 IL7P13232 177 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 C3orf33Q6P1S2 294 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 SFXN4Q6P4A7 337 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 CNIH2Q6PI25 160 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 C6orf15Q6UXA7 325 aaPredicted RBP20.39■□□□□ 0.85
CCDC47-204ENST00000582252 OR2M3Q8NG83 312 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 HTRA1Q92743 480 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 PADI1Q9ULC6 663 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 ZNF281Q9Y2X9 895 aa20.39■□□□□ 0.85
CCDC47-204ENST00000582252 TVP23AA6NH52 213 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 NPIPA5E9PKD4 350 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 HLA-DQA2P01906 255 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 AZGP1P25311 298 aaKnown RBP20.38■□□□□ 0.85
CCDC47-204ENST00000582252 PSMB10P40306 273 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 EIF1P41567 113 aaKnown RBP20.38■□□□□ 0.85
CCDC47-204ENST00000582252 EVX1P49640 407 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 NDUFAF7Q7L592 441 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 ASB17Q8WXJ9 295 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 TEKT2Q9UIF3 430 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 NPIPA1Q9UND3 350 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 B3GALT5Q9Y2C3 310 aa20.38■□□□□ 0.85
CCDC47-204ENST00000582252 TEX51A0A1B0GUA7 166 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 A0A1W2PQ72 361 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 FAM25AB3EWG3 89 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 FAM25CB3EWG5 89 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms