RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 HCFC1P51610 2035 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ICE1Q9Y2F5 2266 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 NPIPB13A6NJU9 1138 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 CPSF4LA6NMK7 179 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 FAM171A2A8MVW0 826 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 NPIPB4C9JG80 1138 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 MS4A18H0YCH9 400 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 PLPP3O14495 311 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 RAMP1O60894 148 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 RAD51DO75771 328 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF432O94892 652 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 MT-ND1P03886 318 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 OPN1SWP03999 348 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 IFNW1P05000 195 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ITGA5P08648 1049 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ITGA2P17301 1181 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 KLK2P20151 261 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 NUDT2P50583 147 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 SEC24CP53992 1094 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 CLDN17P56750 224 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 TAS2R41P59536 307 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 UBE2NP61088 152 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 RPS4XP62701 263 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 RAB1AP62820 205 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 NKX6-1P78426 367 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 IL1RL1Q01638 556 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 PMS2P11Q13670 270 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF74Q16587 644 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 MS4A18Q3C1V0 323 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 NRN1LQ496H8 165 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF672Q499Z4 452 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 GKAP1Q5VSY0 366 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF544Q6NX49 715 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 CBLL1Q75N03 491 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 PIGWQ7Z7B1 504 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 DPPA2Q7Z7J5 298 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 TGIF2LYQ8IUE0 185 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 P3H2Q8IVL5 708 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 CDK20Q8IZL9 346 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ARHGAP24Q8N264 748 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 OR10H5Q8NGA6 315 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 OR1K1Q8NGR3 316 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 OR6X1Q8NH79 312 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 FNDC8Q8TC99 324 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 GEMIN6Q8WXD5 167 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 AKAP1Q92667 903 aaKnown RBP eCLIP6.18□□□□□ -1.42
CASC3-205ENST00000577605 Q96M66 194 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF385AQ96PM9 386 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 KCTD14Q9BQ13 255 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 RSPO3Q9BXY4 272 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 NDEL1Q9GZM8 345 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 UBTD1Q9HAC8 227 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF701Q9NV72 531 aaPredicted RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 CMTM6Q9NX76 183 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ABCD2Q9UBJ2 740 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 RIMS3Q9UJD0 308 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 SAMD4AQ9UPU9 718 aaKnown RBP6.18□□□□□ -1.42
CASC3-205ENST00000577605 MED31Q9Y3C7 131 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ARHGAP21Q5T5U3 1957 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 ZNF407Q9C0G0 2248 aa6.18□□□□□ -1.42
CASC3-205ENST00000577605 SVILO95425 2214 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 PTPN13Q12923 2485 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 RP1L1Q8IWN7 2480 aaPredicted RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 DPRXA6NFQ7 191 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 A6NLC8 198 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ZNF99A8MXY4 864 aaPredicted RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 CXCR6O00574 342 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 SLC16A6O15403 523 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 TRAF3IP2O43734 574 aaPredicted RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 IGHV3-9P01782 118 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 LPLP06858 475 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ASAH2BP0C7U1 165 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 CD99P14209 185 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 AHCYP23526 432 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ARR3P36575 388 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 SELENOPP49908 381 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 DAP3P51398 398 aaKnown RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 SLC7A2P52569 658 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 CRYBA2P53672 197 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 SMIM11AP58511 58 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 PSME3P61289 254 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ROR2Q01974 943 aaKnown RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 BSPH1Q075Z2 132 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.425e-6■■□□□ 14.3
CASC3-205ENST00000577605 CDK5R2Q13319 367 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 TRAM2Q15035 370 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 TSC22D1Q15714 1073 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 LRRC23Q53EV4 343 aaPredicted RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 IFI44LQ53G44 452 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 SAMD4BQ5PRF9 694 aaKnown RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 AGAP6Q5VW22 663 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 C16orf89Q6UX73 402 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 ZNF627Q7L945 461 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 RRM2BQ7LG56 351 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 PIWIL3Q7Z3Z3 882 aaKnown RBP6.17□□□□□ -1.42
CASC3-205ENST00000577605 COMTD1Q86VU5 262 aa6.17□□□□□ -1.42
CASC3-205ENST00000577605 C20orf196Q8IYI0 205 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms