RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 PGA3P0DJD8 388 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 RPL4P36578 427 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 HMGA2P52926 109 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CTXN1P60606 82 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 RAP1BP61224 184 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 RPL27P61353 136 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 RAP1AP62834 184 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 TOP3AQ13472 1001 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CEACAM16Q2WEN9 425 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 TBRG1Q3YBR2 411 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ANKRD16Q6P6B7 361 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 KLHL17Q6TDP4 642 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 C22orf34Q6ZV56 151 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CCDC36Q8IYA8 594 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 MAGEE2Q8TD90 523 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 LURAP1Q96LR2 239 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 TNFRSF13CQ96RJ3 184 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CHID1Q9BWS9 393 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ESRP2Q9H6T0 727 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 EDARQ9UNE0 448 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 SIGLEC7Q9Y286 467 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 POFUT2Q9Y2G5 429 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 SLC25A15Q9Y619 301 aa11.16□□□□□ -0.62
CDK5RAP3-203ENST00000577442 GNGT2O14610 69 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 KLF4O43474 513 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CCNB2O95067 398 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CST1P01037 141 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CD14P08571 375 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 UBE2NP61088 152 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ARMC4Q5T2S8 1044 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 GPR139Q6DWJ6 353 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 LINGO2Q7L985 606 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 CDC20BQ86Y33 519 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 OR4C15Q8NGM1 316 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 OR52N5Q8NH56 324 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 FANK1Q8TC84 345 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 GNPDA2Q8TDQ7 276 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 BCL2L2Q92843 193 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 PLPPR2Q96GM1 343 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 GPX7Q96SL4 187 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 KATNB1Q9BVA0 655 aa11.15□□□□□ -0.62
CDK5RAP3-203ENST00000577442 ARPC4-TTLL3A0A0A6YYG9 625 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 XKRYO14609 159 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 SIAH2O43255 324 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 FKBP6O75344 327 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 CD3EP07766 207 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ACADSP16219 412 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 SLC6A6P31641 620 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ACVR1BP36896 505 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 GSSP48637 474 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ZNF84P51523 738 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 CD47Q08722 323 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 TSPAN31Q12999 210 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 FHL1Q13642 323 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 HIKESHIQ53FT3 197 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 RPL13AP3Q6NVV1 102 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 PGBD2Q6P3X8 592 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 SMARCD3Q6STE5 483 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 TMEM108Q6UXF1 575 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ASRGL1Q7L266 308 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ZER1Q7Z7L7 766 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 IGFN1Q86VF2 1251 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 NANOS1Q8WY41 292 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ZNF570Q96NI8 536 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 TSPAN32Q96QS1 320 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 FOXB1Q99853 325 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 CCM2LQ9NUG4 571 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 MGAT4BQ9UQ53 548 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 RNF115Q9Y4L5 304 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 DSCAMO60469 2012 aa11.14□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ARRDC5A6NEK1 342 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 DHHO43323 396 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 PTP4A3O75365 173 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 DEAF1O75398 565 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 E2F6O75461 281 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 FARS2O95363 451 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 PTAFRP25105 342 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ERVK-25P63136 954 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 MICAQ29983 383 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 PHYHD1Q5SRE7 291 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 NCMAPQ5T1S8 102 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
CDK5RAP3-203ENST00000577442 ZNF813Q6ZN06 617 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms