RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TAAR8Q969N4 342 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 TXNDC15Q96J42 360 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 LRR1Q96L50 414 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 NOP53Q9NZM5 478 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 PRDM4Q9UKN5 801 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 INSIG2Q9Y5U4 225 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 NPHS1O60500 1241 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 IGHMP01871 453 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 NQO1P15559 274 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF12P17014 697 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 HOXC5Q00444 222 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC3A1Q07837 685 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 MAD2L1Q13257 205 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 LIN52Q52LA3 116 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 ASPHD2Q6ICH7 369 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 CNPY4Q8N129 248 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 FAM110DQ8TAY7 271 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 PNPT1Q8TCS8 783 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 DCLRE1CQ96SD1 692 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 NPHS2Q9NP85 383 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
CTDNEP1-211ENST00000575783 LOC102725191A0A1B0GVB3 256 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 MS4A18H0YCH9 400 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR2T1O43869 369 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 UBOX5O94941 541 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 HPRP00739 348 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 IGHV1-46P01743 117 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 KRT4P19013 534 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 UCP2P55851 309 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 KRTAP10-3P60369 221 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 CASP8Q14790 479 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 MS4A18Q3C1V0 323 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 COX20Q5RI15 118 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZDHHC16Q969W1 377 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 MECRQ9BV79 373 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 RNF121Q9H920 327 aa13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
CTDNEP1-211ENST00000575783 CLPSL1A2RUU4 121 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 ARRB2P32121 409 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 RBMXP38159 391 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 FAM209AQ5JX71 171 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 FIP1L1Q6UN15 594 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 PIWIL3Q7Z3Z3 882 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 LRRC34Q8IZ02 419 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 NOA1Q8NC60 698 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 SH3GL3Q99963 347 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
CTDNEP1-211ENST00000575783 CCDC154A6NI56 674 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SMIM23A6NLE4 172 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SERPINI2O75830 405 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 TSPAN15O95858 294 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 NGFP01138 241 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 IGHV3-13P01766 116 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SELEP16581 610 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 CD80P33681 288 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC6A9P48067 706 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 RELBQ01201 579 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 PMS2P3Q13401 168 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 LARS2Q15031 903 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 MAPK11Q15759 364 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 TAF9Q16594 264 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 TBC1D28Q2M2D7 210 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SPANXN4Q5MJ08 99 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF621Q6ZSS3 439 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 C9orf139Q6ZV77 190 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC22A24Q8N4F4 322 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 KLHL36Q8N4N3 616 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 CPEB3Q8NE35 698 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 BCL2L14Q9BZR8 327 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 EGLN1Q9GZT9 426 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 ASIC5Q9NY37 505 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF232Q9UNY5 417 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 POLR3KQ9Y2Y1 108 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 NPTNQ9Y639 398 aa13.72□□□□□ -0.21
CTDNEP1-211ENST00000575783 PLSCR5A0PG75 271 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC22A31A6NKX4 558 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 PRB2P02812 416 aaPredicted RBP13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 CSNK1A1P48729 337 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 PAX8Q06710 450 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 SMU1Q2TAY7 513 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 DEFB112Q30KQ8 113 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 SPATA46Q5T0L3 261 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 NET1Q7Z628 596 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms