RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PMS2P2O95744 297 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 GAAP10253 952 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 APEHP13798 732 aaKnown RBP8.77□□□□□ -1.01
CCDC40-212ENST00000574799 NME2P22392 152 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 GPR1P46091 355 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 OR51D1Q8NGF3 324 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 FOXRED1Q96CU9 486 aaPredicted RBP8.77□□□□□ -1.01
CCDC40-212ENST00000574799 BPIFA2Q96DR5 249 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 OR7D2Q96RA2 312 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 KXD1Q9BQD3 176 aa8.77□□□□□ -1.01
CCDC40-212ENST00000574799 TSPAN10Q9H1Z9 355 aaPredicted RBP8.77□□□□□ -1.01
CCDC40-212ENST00000574799 FCMRO60667 390 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RAD1O60671 282 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 MED6O75586 246 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TBX6O95947 436 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 CA3P07451 260 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 SLC6A6P31641 620 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 EIF2S3P41091 472 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 IL13RA1P78552 427 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 AGERQ15109 404 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ACER2Q5QJU3 275 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ARHGAP40Q5TG30 622 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 C11orf87Q6NUJ2 197 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RTL10Q7L3V2 364 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RAB42Q8N4Z0 105 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 AKR7LQ8NHP1 331 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PHOSPHO2Q8TCD6 241 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 GLYATL1Q969I3 302 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PELI1Q96FA3 418 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ADAD1Q96M93 576 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 AMDHD1Q96NU7 426 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PIGQQ9BRB3 760 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 GSKIPQ9P0R6 139 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 IL36AQ9UHA7 158 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ICKQ9UPZ9 632 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 A0A1B0GV50 99 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TMPRSS11DO60235 418 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 FBXO24O75426 580 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 SERPINA5P05154 406 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TMIGD3P0DMS9 266 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RPS10P46783 165 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RAB5CP51148 216 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ATP1B3P54709 279 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ACTBP60709 375 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 S100A10P60903 97 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ACTG1P63261 375 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ELAVL1Q15717 326 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 GFOD2Q3B7J2 385 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 CDNFQ49AH0 187 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 DMKNQ6E0U4 476 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 DHRS7BQ6IAN0 325 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TTLL10Q6ZVT0 673 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 KCNRGQ8N5I3 272 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 HAVCR2Q8TDQ0 301 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ST7LQ8TDW4 575 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 DIO2Q92813 273 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 HAVCR1Q96D42 359 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 SLC6A7Q99884 636 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 COMMD4Q9H0A8 199 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ACKR4Q9NPB9 350 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 OR5V1Q9UGF6 321 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF281Q9Y2X9 895 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 NPIPA5A0A0B4J1W7 369 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 A0A1B0GV90 55 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 NPIPA7E9PJI5 369 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 CACNB4O00305 520 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 OR2T1O43869 369 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RNGTTO60942 597 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 HNRNPA1P09651 372 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 NPIPA8P0DM63 369 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PGAM2P15259 253 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RAB6AP20340 208 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 LSSP48449 732 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF805Q5CZA5 627 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TMEM151BQ8IW70 566 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 CA5BP1Q8WTZ4 195 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RAB3CQ96E17 227 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 CLCC1Q96S66 551 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 MENTQ9BUN1 341 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 TOLLIPQ9H0E2 274 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RHBGQ9H310 441 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 FKRPQ9H9S5 495 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 RHOFQ9HBH0 211 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF275Q9NSD4 429 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 SIRT3Q9NTG7 399 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-212ENST00000574799 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
CCDC40-212ENST00000574799 PPM1DO15297 605 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 B4GALT2O60909 372 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 HLA-DQA2P01906 255 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ABOP16442 354 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 TYRP1P17643 537 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF85Q03923 595 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 EIF2B1Q14232 305 aaKnown RBP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms