RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 RBM34P42696 430 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 GSG1Q2KHT4 349 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 SLC15A3Q8IY34 581 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 TMEM239Q8WW34 195 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 NANOS1Q8WY41 292 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 ZNF566Q969W8 418 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 VRK1Q99986 396 aaPredicted RBP22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 C20orf141Q9NUB4 165 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 ZNF224Q9NZL3 707 aa22.56■■□□□ 1.2
NPLOC4-215ENST00000574095 A0A096LNT2 108 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 PTDSS1P48651 473 aaKnown RBP22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 SELENOWP63302 87 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 RPL18Q07020 188 aaKnown RBP22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 EFNB3Q15768 340 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 LRFN4Q6PJG9 635 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 ANKS4BQ8N8V4 417 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 IL17RDQ8NFM7 739 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 C10orf105Q8TEF2 133 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 SGTBQ96EQ0 304 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 SLC25A44Q96H78 314 aaPredicted RBP22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 ZNF75AQ96N20 296 aa22.55■■□□□ 1.2
NPLOC4-215ENST00000574095 YLPM1P49750 1951 aaKnown RBP22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 CCDC22O60826 627 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 OR7A10O76100 309 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 BCL10O95999 233 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 F13BP05160 661 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 RAB1AP62820 205 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 KRT80Q6KB66 452 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 PRIMA1Q86XR5 153 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 SKA3Q8IX90 412 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 PLK3Q9H4B4 646 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 ZNF442Q9H7R0 627 aa22.54■■□□□ 1.2
NPLOC4-215ENST00000574095 CD5LO43866 347 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 PATE4P0C8F1 98 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 PGA4P0DJD7 388 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 PGA3P0DJD8 388 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 SLC25A16P16260 332 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 ZNF14P17017 642 aaPredicted RBP22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 NPR2P20594 1047 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 AQP2P41181 271 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 GIPRP48546 466 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 LIPEQ05469 1076 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 SNTB2Q13425 540 aaKnown RBP22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 DAG1Q14118 895 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 PIWIL3Q7Z3Z3 882 aaKnown RBP22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 SPATA21Q7Z572 469 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 ARPINQ7Z6K5 226 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 TREML1Q86YW5 311 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 FGFBP3Q8TAT2 258 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 YAE1D1Q9NRH1 226 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 A4GNTQ9UNA3 340 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 AP3M1Q9Y2T2 418 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 MED31Q9Y3C7 131 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 FKBP7Q9Y680 259 aa22.53■■□□□ 1.2
NPLOC4-215ENST00000574095 VSTM5A8MXK1 200 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 hCG_2039718K7EN88 272 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 DHHO43323 396 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 PIP5K1CO60331 668 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 QDPRP09417 244 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 THRBP10828 461 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 FUT4P22083 530 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 YAP1P46937 504 aaKnown RBP22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 RUNX1T1Q06455 604 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 VTCN1Q7Z7D3 282 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 SVOPLQ8N434 492 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 SLC22A24Q8N4F4 322 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 TNFRSF13CQ96RJ3 184 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 ABCA2Q9BZC7 2435 aa22.52■■□□□ 1.2
NPLOC4-215ENST00000574095 CHD3Q12873 2000 aaKnown RBP22.52■■□□□ 1.19
NPLOC4-215ENST00000574095 A0A1W2PRG6 482 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 TMEM129A0AVI4 362 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 NME4O00746 187 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 UBL3O95164 117 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 RAB36O95755 333 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 IGF2P01344 180 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 CSF3P09919 207 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 SLC7A2P52569 658 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 CLRN1P58418 232 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 MYBPC1Q00872 1141 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 LOXL1Q08397 574 aaPredicted RBP22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 ST3GAL3Q11203 375 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 RAB39AQ14964 217 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 MOSPD2Q8NHP6 518 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 LZICQ8WZA0 190 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 ZNF347Q96SE7 839 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 DOK1Q99704 481 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 HOPXQ9BPY8 73 aaPredicted RBP22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 EFCAB1Q9HAE3 211 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 INIPQ9NRY2 104 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 TMEM38BQ9NVV0 291 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 SNX13Q9Y5W8 968 aa22.51■■□□□ 1.19
NPLOC4-215ENST00000574095 SH3PXD2BA1X283 911 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 MCIDASD6RGH6 385 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 CXCR6O00574 342 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 TLX2O43763 284 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 CRLF1O75462 422 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 IGHG1P01857 330 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 OR8G3PP0DMU2 310 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 ZNF35P13682 527 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 NR4A1P22736 598 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms