RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ANKRD16Q6P6B7 361 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TTC33Q6PID6 262 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 KLHL24Q6TFL4 600 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 Q71RC1 249 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 LINGO2Q7L985 606 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 DTX2Q86UW9 622 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CALHM3Q86XJ0 350 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 RBM45Q8IUH3 476 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 UEVLDQ8IX04 471 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 FBXL14Q8N1E6 418 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 GPR137CQ8N3F9 429 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 PCYOX1LQ8NBM8 494 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ADPRHL1Q8NDY3 354 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 PIK3C3Q8NEB9 887 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 OR8J3Q8NGG0 315 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 OR4D11Q8NGI4 311 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 OR1K1Q8NGR3 316 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 VANGL1Q8TAA9 524 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 ADAMTS16Q8TE57 1224 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 C10orf82Q8WW14 230 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 BCL2L2Q92843 193 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 TAMM41Q96BW9 452 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 SLC41A3Q96GZ6 507 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ZNF583Q96ND8 569 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 DHRS9Q9BPW9 319 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TRAF4Q9BUZ4 470 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 CCDC134Q9H6E4 229 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 FKRPQ9H9S5 495 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 OBP2BQ9NPH6 170 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 MED4Q9NPJ6 270 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 GID8Q9NWU2 228 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 MRPL39Q9NYK5 338 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 KLHL14Q9P2G3 628 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 RCE1Q9Y256 329 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 COA3Q9Y2R0 106 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 SH3GLB1Q9Y371 365 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ATP23Q9Y6H3 246 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ARID1AO14497 2285 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 SETD2Q9BYW2 2564 aaPredicted RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 ARPC4-TTLL3A0A0A6YYG9 625 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 TRAPPC13A5PLN9 417 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ZNF726A6NNF4 738 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 LRRN3E7EW58 273 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 PLPP3O14495 311 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 SLC22A2O15244 555 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ATP8B1O43520 1251 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 AKAP8O43823 692 aaKnown RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 NDUFS7O75251 213 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 OR6A2O95222 327 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 LY6G6DO95868 133 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 HPRP00739 348 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MT-ATP6P00846 226 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 IFNA14P01570 189 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 THY1P04216 161 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ADORA3P0DMS8 318 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 HLA-DOBP13765 273 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 AHCYP23526 432 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 APOBEC3AP31941 199 aaPredicted RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 ARF1P84077 181 aaKnown RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 PUDPQ08623 228 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 SPOCK1Q08629 439 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 CLEC12BQ2HXU8 276 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ZNF544Q6NX49 715 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ERICH5Q6P6B1 374 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 NHLRC1Q6VVB1 395 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 FKBP9P1Q75LS8 142 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 PXKQ7Z7A4 578 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 SNX32Q86XE0 403 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 WFDC3Q8IUB2 231 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MUC15Q8N387 334 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 SCAIQ8N9R8 606 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 OR5J2Q8NH18 312 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 RP9Q8TA86 221 aaKnown RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 MAGEE2Q8TD90 523 aaPredicted RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 PROX1Q92786 737 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 TXNDC15Q96J42 360 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MPP4Q96JB8 637 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 LRR1Q96L50 414 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MOGAT1Q96PD6 335 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 ZNF317Q96PQ6 595 aaPredicted RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 ALKBH3Q96Q83 286 aaPredicted RBP6.48□□□□□ -1.37
NUP88-205ENST00000572809 OR2M2Q96R28 347 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 EMC6Q9BV81 110 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 JAM3Q9BX67 310 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 GPR35Q9HC97 309 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 CBLN4Q9NTU7 201 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 BAG5Q9UL15 447 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 SLC7A7Q9UM01 511 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 USP22Q9UPT9 525 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MOKQ9UQ07 419 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 NOX1Q9Y5S8 564 aa6.48□□□□□ -1.37
NUP88-205ENST00000572809 MTORP42345 2549 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 IGHV1-18A0A0C4DH31 117 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 C22orf46C9J442 243 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 C11orf98E9PRG8 122 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 M0R3G1 203 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 FXYD1O00168 92 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TRAF3IP2O43734 574 aaPredicted RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 CCDC22O60826 627 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 LYPD3O95274 346 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms