RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KPNA4O00629 521 aaPredicted RBP15.6■□□□□ 0.09
CHD3-214ENST00000572579 AKAP8O43823 692 aaKnown RBP15.6■□□□□ 0.09
CHD3-214ENST00000572579 LILRA1O75019 489 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 ADRA2AP08913 450 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 ASAH2BP0C7U1 165 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 GIFP27352 417 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 FXNQ16595 210 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 GSG1Q2KHT4 349 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 VMACQ2NL98 169 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 CGB2Q6NT52 195 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 IL17RELQ6ZVW7 336 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 SLC35D2Q76EJ3 337 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 CCDC80Q76M96 950 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 IL17RDQ8NFM7 739 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 OR6N1Q8NGY5 312 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 VIPAS39Q9H9C1 493 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 GLTPQ9NZD2 209 aa15.6■□□□□ 0.09
CHD3-214ENST00000572579 MYEF2Q9P2K5 600 aaKnown RBP15.6■□□□□ 0.09
CHD3-214ENST00000572579 LOC100289279A0A1B0GTE1 492 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 TRAPPC13A5PLN9 417 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 DAOP14920 347 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 ZNF23P17027 643 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 PTDSS1P48651 473 aaKnown RBP15.59■□□□□ 0.09
CHD3-214ENST00000572579 CSNK1A1P48729 337 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 GZMKP49863 264 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 RAB1AP62820 205 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 SRSF2Q01130 221 aaKnown RBP15.59■□□□□ 0.09
CHD3-214ENST00000572579 SF3A3Q12874 501 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHD3-214ENST00000572579 RIN1Q13671 783 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 MELKQ14680 651 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 RAB39AQ14964 217 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 METTL21CQ5VZV1 264 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 PATL1Q86TB9 770 aaKnown RBP15.59■□□□□ 0.09
CHD3-214ENST00000572579 NKAIN4Q8IVV8 208 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 PAQR4Q8N4S7 273 aaPredicted RBP15.59■□□□□ 0.09
CHD3-214ENST00000572579 MRPL24Q96A35 216 aaKnown RBP15.59■□□□□ 0.09
CHD3-214ENST00000572579 BEX2Q9BXY8 128 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 RAB1BQ9H0U4 201 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 ANK2Q01484 3957 aa15.59■□□□□ 0.09
CHD3-214ENST00000572579 PHF1O43189 567 aaPredicted RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 SHOX2O60902 331 aaPredicted RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 IFNA2P01563 188 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 APEHP13798 732 aaKnown RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 SEC24CP53992 1094 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 TRIP10Q15642 601 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 IQCCQ4KMZ1 466 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 TTC33Q6PID6 262 aaPredicted RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 CARM1Q86X55 608 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 ZNF786Q8N393 782 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 PFN4Q8NHR9 129 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 ZNF583Q96ND8 569 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 SH3GL3Q99963 347 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 TMEM120AQ9BXJ8 343 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 TPK1Q9H3S4 243 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 MYOZ1Q9NP98 299 aaPredicted RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 NANSQ9NR45 359 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 GMPR2Q9P2T1 348 aaKnown RBP15.58■□□□□ 0.08
CHD3-214ENST00000572579 FZR1Q9UM11 496 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 TRIM33Q9UPN9 1127 aa15.58■□□□□ 0.08
CHD3-214ENST00000572579 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.57■□□□□ 0.08
CHD3-214ENST00000572579 TACSTD2P09758 323 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 PGA4P0DJD7 388 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 PGA3P0DJD8 388 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 TCN1P20061 433 aaPredicted RBP15.57■□□□□ 0.08
CHD3-214ENST00000572579 UGT2B15P54855 530 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 HIST3H3Q16695 136 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 TRMT5Q32P41 509 aaKnown RBP15.57■□□□□ 0.08
CHD3-214ENST00000572579 ELFN2Q5R3F8 820 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 FAM120AOSQ5T036 256 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 SLC22A24Q8N4F4 322 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 NEU4Q8WWR8 484 aaPredicted RBP15.57■□□□□ 0.08
CHD3-214ENST00000572579 LRRC58Q96CX6 371 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 SYT3Q9BQG1 590 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 MRPL13Q9BYD1 178 aaKnown RBP15.57■□□□□ 0.08
CHD3-214ENST00000572579 CHODLQ9H9P2 273 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 B3GAT2Q9NPZ5 323 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 C20orf141Q9NUB4 165 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 TMEM38BQ9NVV0 291 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 ZNF229Q9UJW7 825 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 SH3GLB1Q9Y371 365 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 CMAHPQ9Y471 501 aa15.57■□□□□ 0.08
CHD3-214ENST00000572579 RNF13O43567 381 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 SERPINA5P05154 406 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 QDPRP09417 244 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 COL8A2P25067 703 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 GLRXP35754 106 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 ALDH3B1P43353 468 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 KLF10Q13118 480 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 PIN1Q13526 163 aaPredicted RBP15.56■□□□□ 0.08
CHD3-214ENST00000572579 MAD2L1BPQ15013 274 aaPredicted RBP15.56■□□□□ 0.08
CHD3-214ENST00000572579 PIWIL3Q7Z3Z3 882 aaKnown RBP15.56■□□□□ 0.08
CHD3-214ENST00000572579 SLC30A8Q8IWU4 369 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 UBASH3BQ8TF42 649 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 TMEM255BQ8WV15 326 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 SLC25A44Q96H78 314 aaPredicted RBP15.56■□□□□ 0.08
CHD3-214ENST00000572579 MPP4Q96JB8 637 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 ZNF347Q96SE7 839 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 SEPHS2Q99611 448 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 SLC19A3Q9BZV2 496 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 SHARPINQ9H0F6 387 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms