RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 B3GAT1Q9P2W7 334 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TINAGQ9UJW2 476 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 NDRG4Q9ULP0 352 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLEC4AQ9UMR7 237 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 FLVCR1Q9Y5Y0 555 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 HSPE1-MOB4S4R3N1 261 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 NUP214P35658 2090 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CHD8Q9HCK8 2581 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 URB1O60287 2271 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGKV3D-15A0A087WSY6 115 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LOC102725191A0A1B0GVB3 256 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 PRSS37A4D1T9 235 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MBD3L5A6NJ08 208 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR6C65A6NJZ3 312 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF716A6NP11 495 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF724A8MTY0 619 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CENPBD1B2RD01 187 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MS4A18H0YCH9 400 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 H7C1C5 153 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 SURF4O15260 269 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 RAMP1O60894 148 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLIC3O95833 236 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TGM6O95932 706 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TP53P04637 393 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 YES1P07947 543 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TSPAN19P0C672 248 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMIGD3P0DMS9 266 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACADSP16219 412 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 HIST1H1CP16403 213 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 VAMP1P23763 118 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 EPHA2P29317 976 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CRABP1P29762 137 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 AGTR1P30556 359 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 POLR2IP36954 125 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 GUCA1AP43080 201 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CENPAP49450 140 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 P2RY4P51582 365 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LCN6P62502 163 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADARB1P78563 741 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CDK5Q00535 292 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TLE1Q04724 770 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CAMK2DQ13557 499 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 FHL1Q13642 323 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CRMP1Q14194 572 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MS4A18Q3C1V0 323 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 KLHL12Q53G59 568 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF691Q5VV52 312 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MEDAGQ5VYS4 303 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM211Q6ICI0 200 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 PLXDC2Q6UX71 529 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CREB3L2Q70SY1 520 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM214BQ7L5A3 538 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM122BQ7Z309 247 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 FGD2Q7Z6J4 655 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 THAP5Q7Z6K1 395 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TUSC5Q8IXB3 177 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ARIH2OSQ8N7S6 290 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TCEANCQ8N8B7 351 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LRRC75AQ8NAA5 344 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR9Q1Q8NGQ5 310 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR6K6Q8NGW6 343 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR6K3Q8NGY3 331 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR2T4Q8NH00 348 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR6X1Q8NH79 312 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MBD3L2Q8NHZ7 208 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF519Q8TB69 540 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TFAP2CQ92754 450 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM45BQ96B21 275 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 INTS12Q96CB8 462 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC25A44Q96H78 314 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LRR1Q96L50 414 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 MUS81Q96NY9 551 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF385AQ96PM9 386 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ALKBH3Q96Q83 286 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 RBP7Q96R05 134 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR2M2Q96R28 347 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 IL4I1Q96RQ9 567 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 NMNAT3Q96T66 252 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 EMC6Q9BV81 110 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 SFXN3Q9BWM7 321 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 SYT4Q9H2B2 425 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLCO5A1Q9H2Y9 848 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 C12orf49Q9H741 205 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 RNF122Q9H9V4 155 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LIN7BQ9HAP6 207 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 BCO1Q9HAY6 547 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 RPRD1BQ9NQG5 326 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLN6Q9NWW5 311 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 UPB1Q9UBR1 384 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF346Q9UL40 294 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 BLOC1S6Q9UL45 172 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 OSGIN2Q9Y236 505 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 LRCH1Q9Y2L9 728 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 POLR1DQ9Y2S0 133 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPR52Q9Y2T5 361 aa5.85□□□□□ -1.47
CTDNEP1-204ENST00000570484 PTPRQQ9UMZ3 2332 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM238LA0A1B0GVL6 79 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms