RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 IGHV3-20A0A0C4DH32 117 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LOC102725191A0A1B0GVB3 256 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 A0A1W2PQ09 198 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 A0A1W2PRG6 482 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PRSS37A4D1T9 235 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 A6NIZ1 184 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 OR4C45A6NMZ5 311 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF879B4DU55 563 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 B4E171 279 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MS4A18H0YCH9 400 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 XKRYO14609 159 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PIN1P1O15428 100 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SELENOFO60613 162 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SLC25A12O75746 678 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NCR1O76036 304 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 OR6A2O95222 327 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 AHSA1O95433 338 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ABHD16AO95870 558 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 DLGAP3O95886 979 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RAF1P04049 648 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 F13BP05160 661 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 GP1BAP07359 652 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CD63P08962 238 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 TRAPPC2P0DI81 140 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 TRAPPC2BP0DI82 140 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CD37P11049 281 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 EPXP11678 715 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PRKCAP17252 672 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ELK1P19419 428 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SRMP19623 302 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RAB3BP20337 219 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ADH6P28332 368 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 GRPRP30550 384 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PTGS2P35354 604 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ACVR1BP36896 505 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NAA10P41227 235 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 TSPAN7P41732 249 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NR4A2P43354 598 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CCR9P51686 369 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 FBXW4P57775 412 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RAP1BP61224 184 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RAP1AP62834 184 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ROM1Q03395 351 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SELENBP1Q13228 472 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SNTA1Q13424 505 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ALKBH1Q13686 389 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ACKR1Q16570 336 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF239Q16600 458 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NTRK2Q16620 822 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PCK2Q16822 640 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 COL28A1Q2UY09 1125 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MS4A18Q3C1V0 323 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 GXYLT1Q4G148 440 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 TP53I3Q53FA7 332 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PYDC2Q56P42 97 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MESTQ5EB52 335 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 IDNKQ5T6J7 187 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 AGAP6Q5VW22 663 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LIPNQ5VXI9 398 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 FAM205BPQ63HN1 556 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LCN10Q6JVE6 187 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RPTNQ6XPR3 784 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 H1FNTQ75WM6 255 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NRARPQ7Z6K4 114 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 SYT9Q86SS6 491 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LRRC28Q86X40 367 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ARMC10Q8N2F6 343 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 LSM14AQ8ND56 463 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 AGBL5Q8NDL9 886 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF248Q8NDW4 579 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 M1APQ8TC57 530 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ASB17Q8WXJ9 295 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 HTRA1Q92743 480 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 THRSPQ92748 146 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MRGPRX4Q96LA9 322 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 IMMP1LQ96LU5 166 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 AGAP4Q96P64 663 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 GFM1Q96RP9 751 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MRI1Q9BV20 369 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF700Q9H0M5 742 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 WDR76Q9H967 626 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RPRD1BQ9NQG5 326 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF275Q9NSD4 429 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 OCIAD1Q9NX40 245 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 PISDQ9UG56 409 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 MRM2Q9UI43 246 aaKnown RBP4.85□□□□□ -1.63
SF3B3-213ENST00000569687 GNG8Q9UK08 70 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CAMK2AQ9UQM7 478 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 RASD1Q9Y272 281 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 B3GALT5Q9Y2C3 310 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 NUP210LQ5VU65 1888 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CABIN1Q9Y6J0 2220 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 CACNA1EQ15878 2313 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 WDFY4Q6ZS81 3184 aa4.85□□□□□ -1.63
SF3B3-213ENST00000569687 VPS13AQ96RL7 3174 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 UNC13CQ8NB66 2214 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms