RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	MYEF2	Q9P2K5	600 aa	Known RBP	13.47	□□□□□ -0.25
HERPUD1-215	ENST00000568676	LOC105371242	A0A075B767	164 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	FARS2	O95363	451 aa	Known RBP	13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	SNAP29	O95721	258 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	HPR	P00739	348 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	MT-ATP6	P00846	226 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	OR8G3P	P0DMU2	310 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	HLA-DOB	P13765	273 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	ZNF250	P15622	560 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	FPR2	P25090	351 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	CSNK1A1	P48729	337 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	AQP5	P55064	265 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	FOXL1	Q12952	345 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	RAB39A	Q14964	217 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	KRT71	Q3SY84	523 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	AWAT1	Q58HT5	328 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	SHISA2	Q6UWI4	295 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	NHLRC1	Q6VVB1	395 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TREML1	Q86YW5	311 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	BPIFB2	Q8N4F0	458 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	SYNPR	Q8TBG9	265 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	AEN	Q8WTP8	325 aa	Known RBP	13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	C11orf40	Q8WZ69	217 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TIMD4	Q96H15	378 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TMEM43	Q9BTV4	400 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TMPRSS13	Q9BYE2	586 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TMEM27	Q9HBJ8	222 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	THAP1	Q9NVV9	213 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	TAAR3P	Q9P1P4	343 aa		13.46	□□□□□ -0.25
HERPUD1-215	ENST00000568676	IGHV1-69-2	A0A0G2JMI3	117 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	PRORSD1P	A6NEY8	169 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	CLDN25	C9JDP6	229 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	CLIC1	O00299	241 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	PLPP2	O43688	288 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MGRN1	O60291	552 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RGS9	O75916	674 aa	Predicted RBP	13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	BGLAP	P02818	100 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	CBL	P22681	906 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	HTR2A	P28223	471 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RAD52	P43351	418 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MAGEB1	P43366	347 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	POLR2J	P52435	117 aa	Known RBP	13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	VSNL1	P62760	191 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	NRN1L	Q496H8	165 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	DCAF12L2	Q5VW00	463 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	NXN	Q6DKJ4	435 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ZNF584	Q8IVC4	421 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	SLC22A24	Q8N4F4	322 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	SLC30A7	Q8NEW0	376 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	OR1J2	Q8NGS2	313 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ZNF519	Q8TB69	540 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RAB1C	Q92928	201 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	VPS33A	Q96AX1	596 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	TXNDC15	Q96J42	360 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MAEL	Q96JY0	434 aa	Known RBP	13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ZNF747	Q9BV97	191 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	BCL2L14	Q9BZR8	327 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	DDX28	Q9NUL7	540 aa	Known RBP	13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	FZR1	Q9UM11	496 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MGAM2	Q2M2H8	2515 aa		13.45	□□□□□ -0.26
HERPUD1-215	ENST00000568676		A0A0B4J2E0	115 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676		A0A1B0GX12	115 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	PLPP3	O14495	311 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	DEAF1	O75398	565 aa	Predicted RBP	13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	AVP	P01185	164 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	IGHV2-5	P01817	119 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	NUDT7	P0C024	238 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	PPIB	P23284	216 aa	Known RBP	13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	AHCY	P23526	432 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	CCL8	P80075	99 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RBBP4	Q09028	425 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	HFE	Q30201	348 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	GTDC1	Q4AE62	458 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	TMEM53	Q6P2H8	277 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RETREG3	Q86VR2	466 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	SKA3	Q8IX90	412 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MREG	Q8N565	214 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	GOLGA6L1	Q8N7Z2	621 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	OR5J2	Q8NH18	312 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	OR6X1	Q8NH79	312 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	GTF2H4	Q92759	462 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	TMEM54	Q969K7	222 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MAL2	Q969L2	176 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	LRMDA	Q9H2I8	198 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ZMAT3	Q9HA38	289 aa	Known RBP	13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	CDH20	Q9HBT6	801 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	TCF7L2	Q9NQB0	619 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	DECR2	Q9NUI1	292 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	GLTP	Q9NZD2	209 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	SLC13A4	Q9UKG4	626 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MEGF8	Q7Z7M0	2845 aa		13.44	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ZNF500	O60304	480 aa	Predicted RBP	13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	OR6A2	O95222	327 aa		13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	ARAF	P10398	606 aa		13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	RGS8	P57771	180 aa	Predicted RBP	13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	MVK	Q03426	396 aa		13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	OR1Q1	Q15612	314 aa		13.43	□□□□□ -0.26
HERPUD1-215	ENST00000568676	TBC1D28	Q2M2D7	210 aa		13.43	□□□□□ -0.26

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