RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 A0A0A6YYC8 382 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 CENPVL1A0A0U1RR11 272 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 MED19A0JLT2 244 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 RFPL4AA6NLU0 287 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 RFPL4AL1F8VTS6 287 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 I3L1I5 382 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 TNFSF12O43508 249 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 TGM5O43548 720 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SRPX2O60687 465 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 PMS2P2O95744 297 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 TYRP1P17643 537 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 S1PR1P21453 382 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 NDUFA6P56556 154 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 C21orf58P58505 322 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 HTR3DQ70Z44 454 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 C5orf34Q96MH7 638 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 NECAB3Q96P71 396 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 FAM83CQ9BQN1 747 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 EPHA6Q9UF33 1036 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 WDR81Q562E7 1941 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 DOCK3Q8IZD9 2030 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 VEGFDO43915 354 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ADH6P28332 368 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ZNF674Q2M3X9 581 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 DEFB110Q30KQ9 67 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 C2orf76Q3KRA6 126 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ALG10Q5BKT4 473 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 PWWP2BQ6NUJ5 590 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 TFAP2EQ6VUC0 442 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 GRASPQ7Z6J2 395 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 NAXDQ8IW45 347 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 OR10H5Q8NGA6 315 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 OR52E1Q8NGJ3 308 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 OR5K2Q8NHB8 316 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 STK35Q8TDR2 534 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 AKR1E2Q96JD6 320 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ST6GALNAC5Q9BVH7 336 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 PVRP15151 417 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 MAOAP21397 527 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 VIPR2P41587 438 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 PTGFRP43088 359 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 NR0B1P51843 470 aaKnown RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 SEC13P55735 322 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 DUSP2Q05923 314 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SERTAD2Q14140 314 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SLC25A30Q5SVS4 291 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 DMKNQ6E0U4 476 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 OR13C3Q8NGS6 347 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 MIB2Q96AX9 1013 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 SEC61A2Q9H9S3 476 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 CTSFQ9UBX1 484 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ZNF223Q9UK11 482 aaPredicted RBP9.99□□□□□ -0.81
PALB2-206ENST00000568219 SLC22A13Q9Y226 551 aa9.99□□□□□ -0.81
PALB2-206ENST00000568219 ANKRD20A5PA0PJZ0 165 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 GPR89AB7ZAQ6 455 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 DNASE2O00115 360 aaPredicted RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 SULT1B1O43704 296 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 FGF2P09038 288 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 GPR89BP0CG08 455 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 GAAP10253 952 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 CAMLGP49069 296 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 LIMK1P53667 647 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 CHAF1BQ13112 559 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 ALKBH1Q13686 389 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 ERN2Q76MJ5 926 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 COX15Q7KZN9 410 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 ZNF679Q8IYX0 411 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 FRMD1Q8N878 549 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 OR14K1Q8NGZ2 314 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 MS4A6EQ96DS6 147 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 AHCYL2Q96HN2 611 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 TLNRD1Q9H1K6 362 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 MRPS18AQ9NVS2 196 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 MOKQ9UQ07 419 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 A0A087WV62 115 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 EFCAB7A8K855 629 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 GPANK1O95872 356 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 PMP2P02689 132 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 THBS2P35442 1172 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 NPY4RP50391 375 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 ERV3-1Q14264 604 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 IRF4Q15306 451 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 RBMS3Q6XE24 437 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 LDLRAD3Q86YD5 345 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 DND1Q8IYX4 353 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 RNF113BQ8IZP6 322 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 RXFP4Q8TDU9 374 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 SLC25A28Q96A46 364 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 HHIPL1Q96JK4 782 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 SLC19A3Q9BZV2 496 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 Q9N2J8 555 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 KCNJ16Q9NPI9 418 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 NYNRINQ9P2P1 1898 aaKnown RBP9.98□□□□□ -0.81
PALB2-206ENST00000568219 MSRAQ9UJ68 235 aa9.98□□□□□ -0.81
PALB2-206ENST00000568219 FBXL21Q9UKT6 434 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms