RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 LRBAP50851 2863 aa11.38□□□□□ -0.59
CNOT1-213ENST00000568158 HRNRQ86YZ3 2850 aaPredicted RBP11.38□□□□□ -0.59
CNOT1-213ENST00000568158 NAV2Q8IVL1 2488 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 MCIDASD6RGH6 385 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 M0R1B8 84 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 TNFRSF11BO00300 401 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ATP5HO75947 161 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 CD3EP07766 207 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 QDPRP09417 244 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 PGA4P0DJD7 388 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 PGA3P0DJD8 388 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ACVR1BP36896 505 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 MAGEA2P43356 314 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 LIMS1P48059 325 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 SLC9A3P48764 834 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 IST1P53990 364 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 NR1H2P55055 460 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 CLRN1P58418 232 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 RPL27P61353 136 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 RPS4XP62701 263 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ERVK-25P63136 954 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 TOP3AQ13472 1001 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 FAM98BQ52LJ0 330 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ZNF704Q6ZNC4 412 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ADGRG5Q8IZF4 528 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 C17orf78Q8N4C9 275 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 CANT1Q8WVQ1 401 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 HDAC2Q92769 488 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 MCHR2Q969V1 340 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 CHID1Q9BWS9 393 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ESRP2Q9H6T0 727 aaKnown RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 UBTD1Q9HAC8 227 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 CCM2LQ9NUG4 571 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-213ENST00000568158 VNN3Q9NY84 501 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 IL20RAQ9UHF4 553 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 TMCC3Q9ULS5 477 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 SIGLEC7Q9Y286 467 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 ROS1P08922 2347 aa11.37□□□□□ -0.59
CNOT1-213ENST00000568158 POLQO75417 2590 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 ZNF503-AS2A6NEH8 195 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 UNC119BA6NIH7 251 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 AQP12BA6NM10 295 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 ZNF99A8MXY4 864 aaPredicted RBP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 DHHO43323 396 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 OR10H3O60404 316 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 WNT11O96014 354 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 RPL4P36578 427 aaKnown RBP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 RASSF2P50749 326 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 SH3BGRP55822 239 aaPredicted RBP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 FXYD6P3P58550 94 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 HIST3H3Q16695 136 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 KLHL24Q6TFL4 600 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 THSD4Q6ZMP0 1018 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 SPATA24Q86W54 205 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 AQP12AQ8IXF9 295 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 MAGEE2Q8TD90 523 aaPredicted RBP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 AKAP1Q92667 903 aaKnown RBP eCLIP11.36□□□□□ -0.59
CNOT1-213ENST00000568158 HTRA1Q92743 480 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 TSPAN32Q96QS1 320 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 FOXB1Q99853 325 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 SLC7A8Q9UHI5 535 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 RNF115Q9Y4L5 304 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 DSCAMO60469 2012 aa11.36□□□□□ -0.59
CNOT1-213ENST00000568158 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 ABCD4O14678 606 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 KRT36O76013 467 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 GASTP01350 101 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 IGHG1P01857 330 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 RAP2AP10114 183 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 CD40P25942 277 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 HOXC12P31275 282 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 DAP3P51398 398 aaKnown RBP11.35□□□□□ -0.59
CNOT1-213ENST00000568158 PIGFQ07326 219 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 FLOT2Q14254 428 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 OR2T5Q6IEZ7 315 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 ADAM5Q6NVV9 412 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 C1orf94Q6P1W5 598 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 KLHL17Q6TDP4 642 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 ZNF813Q6ZN06 617 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 SSX8Q7RTT4 187 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 CLDN22Q8N7P3 220 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 KBTBD8Q8NFY9 601 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 OR4C15Q8NGM1 316 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 OR2T29Q8NH02 315 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 GNPDA2Q8TDQ7 276 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 RSRC1Q96IZ7 334 aaKnown RBP11.35□□□□□ -0.59
CNOT1-213ENST00000568158 Q96M85 177 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 KATNB1Q9BVA0 655 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 TRIM15Q9C019 465 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 ADAM18Q9Y3Q7 739 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 U3KQV3 271 aa11.35□□□□□ -0.59
CNOT1-213ENST00000568158 TEX15Q9BXT5 2789 aa11.34□□□□□ -0.59
CNOT1-213ENST00000568158 ARPC4-TTLL3A0A0A6YYG9 625 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms