RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TMEM5Q9Y2B1 443 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 AMDHD2Q9Y303 409 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 LYVE1Q9Y5Y7 322 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 HIVEP1P15822 2718 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ITPR3Q14573 2671 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 A0A096LPE4 126 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 A0A1W2PPZ6 126 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 A0A1W2PRG6 482 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 AQP12BA6NM10 295 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF726A6NNF4 738 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF99A8MXY4 864 aaPredicted RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 MCIDASD6RGH6 385 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 GSC2O15499 205 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 PTP4A3O75365 173 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 TRMUO75648 421 aaKnown RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 GADD45GO95257 159 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 BCL10O95999 233 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF83P51522 516 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF133P52736 654 aaPredicted RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 TUBA1BP68363 451 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 TUBA4AP68366 448 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 TESK1Q15569 626 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ANKDD1AQ495B1 522 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 C1QTNF12Q5T7M4 302 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ADAM5Q6NVV9 412 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ANKRD16Q6P6B7 361 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 LRFN4Q6PJG9 635 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 TUBA1AQ71U36 451 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZER1Q7Z7L7 766 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 OAFQ86UD1 273 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 AQP12AQ8IXF9 295 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 NOXO1Q8NFA2 376 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 KBTBD8Q8NFY9 601 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 OR6N1Q8NGY5 312 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF519Q8TB69 540 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 HDAC2Q92769 488 aaKnown RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 NEUROG1Q92886 237 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 NINJ1Q92982 152 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF566Q969W8 418 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 MUCL1Q96DR8 90 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 ALPK1Q96QP1 1244 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF347Q96SE7 839 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 GPX7Q96SL4 187 aaPredicted RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 ULBP2Q9BZM5 246 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 TXNIPQ9H3M7 391 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ESRP2Q9H6T0 727 aaKnown RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 NOX3Q9HBY0 568 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 OBP2BQ9NPH6 170 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 CCM2LQ9NUG4 571 aaPredicted RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 GLTPQ9NZD2 209 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 ZNF224Q9NZL3 707 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 CRNNQ9UBG3 495 aaPredicted RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 SLC7A8Q9UHI5 535 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 POMPQ9Y244 141 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 SIGLEC7Q9Y286 467 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 PLEKHA6Q9Y2H5 1048 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 RNF115Q9Y4L5 304 aa8.56□□□□□ -1.04
CLK3-220ENST00000567992 PRRC2AP48634 2157 aaKnown RBP8.56□□□□□ -1.04
CLK3-220ENST00000567992 IGKV1D-43A0A0B4J1Z2 117 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 IGHV1-18A0A0C4DH31 117 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 ABCD4O14678 606 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 IGHG1P01857 330 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 RAF1P04049 648 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 CD3EP07766 207 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 B4GALT1P15291 398 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 ACADSP16219 412 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 CD53P19397 219 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 CD40P25942 277 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 DAP3P51398 398 aaKnown RBP8.55□□□□□ -1.04
CLK3-220ENST00000567992 HMGA2P52926 109 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 IST1P53990 364 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 SMIM11AP58511 58 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 PRPS1P60891 318 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 RPL27P61353 136 aaKnown RBP8.55□□□□□ -1.04
CLK3-220ENST00000567992 TOP3AQ13472 1001 aaPredicted RBP8.55□□□□□ -1.04
CLK3-220ENST00000567992 TAF11Q15544 211 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 ZBED5Q49AG3 693 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 C10orf128Q5T292 105 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 ZNF770Q6IQ21 691 aaPredicted RBP8.55□□□□□ -1.04
CLK3-220ENST00000567992 PGBD2Q6P3X8 592 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 KLHL24Q6TFL4 600 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 THSD4Q6ZMP0 1018 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 CCDC121Q6ZUS5 278 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 FAM122BQ7Z309 247 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 MYPOPQ86VE0 399 aaPredicted RBP8.55□□□□□ -1.04
CLK3-220ENST00000567992 CLDN22Q8N7P3 220 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 MCHR2Q969V1 340 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 KCNK17Q96T54 332 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 KATNB1Q9BVA0 655 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 C1QTNF6Q9BXI9 259 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 LRMDAQ9H2I8 198 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 SEC61A2Q9H9S3 476 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 NGBQ9NPG2 151 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 B3GAT2Q9NPZ5 323 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 TMEM38BQ9NVV0 291 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms