RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ROPN1L	Q96C74	230 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	SLC25A36	Q96CQ1	311 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	OXGR1	Q96P68	337 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	OR2M2	Q96R28	347 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	FOXB1	Q99853	325 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	BCL2L14	Q9BZR8	327 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	FN3KRP	Q9HA64	309 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	B3GAT2	Q9NPZ5	323 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.55	□□□□□ -0.56
SMG1-213	ENST00000567737	LRCH1	Q9Y2L9	728 aa		11.55	□□□□□ -0.56
SMG1-213	ENST00000567737		F5H0A9	414 aa	Predicted RBP	11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	XPNPEP2	O43895	674 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	MPIG6B	O95866	241 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	IGHV3-13	P01766	116 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	AQP5	P55064	265 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	BST1	Q10588	318 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	PMS2P3	Q13401	168 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	GALNTL6	Q49A17	601 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	TTMP	Q5BVD1	217 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	CLEC6A	Q6EIG7	209 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	C6orf89	Q6UWU4	347 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	DDIAS	Q8IXT1	998 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	TMEM123	Q8N131	208 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	CADM2	Q8N3J6	435 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	OR2T11	Q8NH01	316 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	MFSD8	Q8NHS3	518 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	THOC1	Q96FV9	657 aa	Known RBP	11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	PAFAH2	Q99487	392 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	C16orf95	Q9H693	158 aa		11.54	□□□□□ -0.56
SMG1-213	ENST00000567737	IGHV2-70D	A0A0C4DH43	119 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	RNF103-CHMP3	A0A140T963	221 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	PRAMEF27	A3QJZ7	478 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	TMEM114	B3SHH9	223 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	OR12D1	P0DN82	309 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	CCL2	P13500	99 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	NAA20	P61599	178 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	BTG1	P62324	171 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	HBA1	P69905	142 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	CHI3L2	Q15782	390 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	GPAT3	Q53EU6	434 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737		Q6ZSV7	163 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737		Q6ZTK2	550 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	C20orf196	Q8IYI0	205 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	RAB40A	Q8WXH6	277 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	TNFRSF12A	Q9NP84	129 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	TMEM106B	Q9NUM4	274 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	B3GAT1	Q9P2W7	334 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	TRIM33	Q9UPN9	1127 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	UTP11	Q9Y3A2	253 aa	Known RBP	11.53	□□□□□ -0.56
SMG1-213	ENST00000567737	COL7A1	Q02388	2944 aa		11.53	□□□□□ -0.56
SMG1-213	ENST00000567737		A0A096LPI6	279 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	LSM1	O15116	133 aa	Known RBP	11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	RAD51C	O43502	376 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	ZNF500	O60304	480 aa	Predicted RBP	11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	PATE4	P0C8F1	98 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	MAPK1	P28482	360 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	UCP2	P55851	309 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	COPZ1	P61923	177 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	PAX2	Q02962	417 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	COL10A1	Q03692	680 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	FUT5	Q11128	374 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	GNA13	Q14344	377 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	HERPUD1	Q15011	391 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	TBC1D28	Q2M2D7	210 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	GDPGP1	Q6ZNW5	385 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	LCA5	Q86VQ0	697 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	LRRC28	Q86X40	367 aa	Predicted RBP	11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	CLEC4F	Q8N1N0	589 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	MIPOL1	Q8TD10	442 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	GEMIN6	Q8WXD5	167 aa	Known RBP	11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	PHF21A	Q96BD5	680 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	CCDC126	Q96EE4	140 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	LRR1	Q96L50	414 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	ULBP2	Q9BZM5	246 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	DPY30	Q9C005	99 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	C1orf198	Q9H425	327 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	DCAF16	Q9NXF7	216 aa		11.52	□□□□□ -0.57
SMG1-213	ENST00000567737	FTCDNL1	E5RQL4	147 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	POC1B-GALNT4	F8VUJ3	575 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	NPIPB7	O75200	414 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	SNAP29	O95721	258 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	RPS5	P46782	204 aa	Known RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	IDH3A	P50213	366 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	MMP15	P51511	669 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	GNB2	P62879	340 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	EGR3	Q06889	387 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	DBP	Q10586	325 aa	Predicted RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	HNRNPA0	Q13151	305 aa	Known RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	CFAP157	Q5JU67	520 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	LCE2A	Q5TA79	106 aa	Predicted RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	LCE2C	Q5TA81	110 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	WBP2NL	Q6ICG8	309 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	ZDHHC24	Q6UX98	284 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	FRMD7	Q6ZUT3	714 aa		11.51	□□□□□ -0.57
SMG1-213	ENST00000567737	ZNF440	Q8IYI8	595 aa		11.51	□□□□□ -0.57

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