RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 RUNX1T1Q06455 604 aa18.92■□□□□ 0.62
NME3-210ENST00000567271 ARMC4Q5T2S8 1044 aa18.92■□□□□ 0.62
NME3-210ENST00000567271 TMEM108Q6UXF1 575 aa18.92■□□□□ 0.62
NME3-210ENST00000567271 LILRB1Q8NHL6 650 aaPredicted RBP18.92■□□□□ 0.62
NME3-210ENST00000567271 MRPL13Q9BYD1 178 aaKnown RBP18.92■□□□□ 0.62
NME3-210ENST00000567271 TXNIPQ9H3M7 391 aa18.92■□□□□ 0.62
NME3-210ENST00000567271 CCM2LQ9NUG4 571 aaPredicted RBP18.92■□□□□ 0.62
NME3-210ENST00000567271 ITGB1BP2Q9UKP3 347 aa18.92■□□□□ 0.62
NME3-210ENST00000567271 CADP27708 2225 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 CENPBD1B2RD01 187 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 MCIDASD6RGH6 385 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 DNAJC8O75937 253 aaPredicted RBP18.91■□□□□ 0.62
NME3-210ENST00000567271 IGHG1P01857 330 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 PTAFRP25105 342 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 RRM2P31350 389 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 LIMS1P48059 325 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 UBE2NP61088 152 aaKnown RBP18.91■□□□□ 0.62
NME3-210ENST00000567271 KEAP1Q14145 624 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 TAF11Q15544 211 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 HIST3H3Q16695 136 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 ZBED5Q49AG3 693 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 ADAM5Q6NVV9 412 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 LRFN4Q6PJG9 635 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 ZNF627Q7L945 461 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 HDDC2Q7Z4H3 204 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 LRGUKQ96M69 825 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 POFUT2Q9Y2G5 429 aa18.91■□□□□ 0.62
NME3-210ENST00000567271 M0R1B8 84 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 GSC2O15499 205 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 PTP4A3O75365 173 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 TRMUO75648 421 aaKnown RBP18.9■□□□□ 0.62
NME3-210ENST00000567271 STAMBPO95630 424 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 ACADSP16219 412 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 CD53P19397 219 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 PAX7P23759 505 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 CD40P25942 277 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 CTXN1P60606 82 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 IGFN1Q86VF2 1251 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 AKAP1Q92667 903 aaKnown RBP eCLIP18.9■□□□□ 0.62
NME3-210ENST00000567271 MBD6Q96DN6 1003 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 ALPK1Q96QP1 1244 aa18.9■□□□□ 0.62
NME3-210ENST00000567271 KRCC1Q9NPI7 259 aaPredicted RBP18.9■□□□□ 0.62
NME3-210ENST00000567271 STX18Q9P2W9 335 aaKnown RBP18.9■□□□□ 0.62
NME3-210ENST00000567271 ZNF346Q9UL40 294 aaKnown RBP18.9■□□□□ 0.62
NME3-210ENST00000567271 ABCD4O14678 606 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 HS3ST1O14792 307 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 KRT36O76013 467 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 SEC14L2O76054 403 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 IGHMP01871 453 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 ZNF26P17031 533 aaPredicted RBP18.89■□□□□ 0.61
NME3-210ENST00000567271 HMGA2P52926 109 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 CLRN1P58418 232 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 TUBA1BP68363 451 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 TUBA4AP68366 448 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 CHRNB3Q05901 458 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 FAM98BQ52LJ0 330 aaKnown RBP18.89■□□□□ 0.61
NME3-210ENST00000567271 C20orf204Q6ZNR8 217 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 TUBA1AQ71U36 451 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 ZER1Q7Z7L7 766 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 NOXO1Q8NFA2 376 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 KBTBD8Q8NFY9 601 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 RADILQ96JH8 1075 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 GPA33Q99795 319 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 FOXB1Q99853 325 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 CADM1Q9BY67 442 aaKnown RBP18.89■□□□□ 0.61
NME3-210ENST00000567271 TRIM15Q9C019 465 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 TMCC3Q9ULS5 477 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 MGAT4BQ9UQ53 548 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 AURKCQ9UQB9 309 aa18.89■□□□□ 0.61
NME3-210ENST00000567271 RAI1Q7Z5J4 1906 aaPredicted RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 AQP12BA6NM10 295 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 SHISA9B4DS77 424 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 DHHO43323 396 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 ATP5HO75947 161 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 QDPRP09417 244 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 RPL27P61353 136 aaKnown RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 TOP3AQ13472 1001 aaPredicted RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 ZNF672Q499Z4 452 aaPredicted RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 ZNF813Q6ZN06 617 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 AQP12AQ8IXF9 295 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 CCDC36Q8IYA8 594 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 ZNF611Q8N823 705 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 SYT14Q8NB59 555 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 HDAC2Q92769 488 aaKnown RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 NEUROG1Q92886 237 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 MCHR2Q969V1 340 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 TSPAN32Q96QS1 320 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 CRNNQ9UBG3 495 aaPredicted RBP18.88■□□□□ 0.61
NME3-210ENST00000567271 SIGLEC7Q9Y286 467 aa18.88■□□□□ 0.61
NME3-210ENST00000567271 UNC119BA6NIH7 251 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 OR10H3O60404 316 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 B4GALT1P15291 398 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 ACVR1BP36896 505 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 RASSF2P50749 326 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 ZNF133P52736 654 aaPredicted RBP18.87■□□□□ 0.61
NME3-210ENST00000567271 TESK1Q15569 626 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
NME3-210ENST00000567271 FAM169BQ8N8A8 192 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 RSRC1Q96IZ7 334 aaKnown RBP18.87■□□□□ 0.61
NME3-210ENST00000567271 MOV10Q9HCE1 1003 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms