RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 NR1H2P55055 460 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 HIST3H3Q16695 136 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 PHYHD1Q5SRE7 291 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 CARD17Q5XLA6 110 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF770Q6IQ21 691 aaPredicted RBP18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 ANKRD16Q6P6B7 361 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF627Q7L945 461 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 ULBP2Q9BZM5 246 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 SLC17A5Q9NRA2 495 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 GLTPQ9NZD2 209 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 AMDHD2Q9Y303 409 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 SAMHD1Q9Y3Z3 626 aaKnown RBP18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 SLC25A15Q9Y619 301 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 CCDC168Q8NDH2 2452 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 UNC119BA6NIH7 251 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 NDUFB2O95178 105 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 CST1P01037 141 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 NR2C1P13056 603 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 HOXB1P14653 301 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF26P17031 533 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 PAX7P23759 505 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 GSSP48637 474 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 CTXN1P60606 82 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 RPL27P61353 136 aaKnown RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 CEACAM16Q2WEN9 425 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 C1orf146Q5VVC0 180 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 PGBD2Q6P3X8 592 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 WFDC8Q8IUA0 241 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 NOXO1Q8NFA2 376 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 GPA33Q99795 319 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 POLDIP3Q9BY77 421 aaKnown RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 VNN3Q9NY84 501 aa18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 MAGED1Q9Y5V3 778 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-205ENST00000566016 FKBP6O75344 327 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 CD14P08571 375 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 ACADSP16219 412 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 LOXP28300 417 aaPredicted RBP18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF133P52736 654 aaPredicted RBP18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 TSPAN31Q12999 210 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 WDR31Q8NA23 367 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF519Q8TB69 540 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 BCL2L2Q92843 193 aaPredicted RBP18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF837Q96EG3 531 aaPredicted RBP18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 KATNB1Q9BVA0 655 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 NELFAQ9H3P2 528 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 SMURF2Q9HAU4 748 aa18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 MOV10Q9HCE1 1003 aaKnown RBP18.46■□□□□ 0.55
SHCBP1-205ENST00000566016 ARPC4-TTLL3A0A0A6YYG9 625 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 ARRDC5A6NEK1 342 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 A6NIZ1 184 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 CIB2O75838 187 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 CCNB2O95067 398 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 CLRN1P58418 232 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 FXYD6P3P58550 94 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 RAP1BP61224 184 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 RAP1AP62834 184 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 RUNX1T1Q06455 604 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 MICAQ29983 383 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 TBRG1Q3YBR2 411 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 FBXW10Q5XX13 1052 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 SMARCD3Q6STE5 483 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 KLHL24Q6TFL4 600 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 FAM122BQ7Z309 247 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 FNDC8Q8TC99 324 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 GNPDA2Q8TDQ7 276 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 UTP4Q969X6 686 aaKnown RBP18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 SLCO4A1Q96BD0 722 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 LURAP1Q96LR2 239 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 KCNK17Q96T54 332 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 ALG12Q9BV10 488 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 NRIP3Q9NQ35 241 aa18.46■□□□□ 0.54
SHCBP1-205ENST00000566016 RAI1Q7Z5J4 1906 aaPredicted RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 CSMD1Q96PZ7 3565 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 TRMUO75648 421 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 APEHP13798 732 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 RPL4P36578 427 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 ARF1P84077 181 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 LRFN4Q6PJG9 635 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 YTHDF3Q7Z739 585 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 IGFN1Q86VF2 1251 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 CCDC36Q8IYA8 594 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 ARIH2OSQ8N7S6 290 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 OR9Q2Q8NGE9 314 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 OR52N5Q8NH56 324 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 FANK1Q8TC84 345 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 NMD3Q96D46 503 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 PIK3IP1Q96FE7 263 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 DUS3LQ96G46 650 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 TSPAN32Q96QS1 320 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 ESRP2Q9H6T0 727 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 U3KQV3 271 aa18.45■□□□□ 0.54
SHCBP1-205ENST00000566016 CYSRT1A8MQ03 144 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 WNT11O96014 354 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 KRTAP10-9P60411 292 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 TOP3AQ13472 1001 aaPredicted RBP18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 NRN1LQ496H8 165 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 HIKESHIQ53FT3 197 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 GPR139Q6DWJ6 353 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms