RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
USB1-210ENST00000565151 ULBP2Q9BZM5 246 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 NANSQ9NR45 359 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 CMTM6Q9NX76 183 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 RIMS3Q9UJD0 308 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 ZNF229Q9UJW7 825 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 SNX13Q9Y5W8 968 aa12.69□□□□□ -0.38
USB1-210ENST00000565151 ZNF726A6NNF4 738 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 PIP5K1CO60331 668 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 F13BP05160 661 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 CD79AP11912 226 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 SLC25A16P16260 332 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 NR4A1P22736 598 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 PAX7P23759 505 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 NR4A2P43354 598 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 CAPZA2P47755 286 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 CSNK1A1P48729 337 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 SNRPD2P62316 118 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 FXNQ16595 210 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 HIST3H3Q16695 136 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 GSG1Q2KHT4 349 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 CYBRD1Q53TN4 286 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 LRP11Q86VZ4 500 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 MEX3DQ86XN8 651 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 MOSPD2Q8NHP6 518 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 SLC26A7Q8TE54 656 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 PROX1Q92786 737 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 MPP4Q96JB8 637 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 SEPHS2Q99611 448 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 SH3GL3Q99963 347 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 KCNS3Q9BQ31 491 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 MRPL37Q9BZE1 423 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 MYEF2Q9P2K5 600 aaKnown RBP12.68□□□□□ -0.38
USB1-210ENST00000565151 A4GNTQ9UNA3 340 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 POFUT2Q9Y2G5 429 aa12.68□□□□□ -0.38
USB1-210ENST00000565151 IGKV1D-43A0A0B4J1Z2 117 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 SH3PXD2BA1X283 911 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 A8MV72 311 aaPredicted RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 RNF13O43567 381 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 OR7A10O76100 309 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 MT-ND1P03886 318 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 TP53P04637 393 aaPredicted RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 TROVE2P10155 538 aaKnown RBP eCLIP12.67□□□□□ -0.38
USB1-210ENST00000565151 NPR2P20594 1047 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 KDELR2P33947 212 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 AQP2P41181 271 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 GIPRP48546 466 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 PPOXP50336 477 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 RAB1AP62820 205 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 FHL1Q13642 323 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 RAB39AQ14964 217 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 C8orf82Q6P1X6 216 aaPredicted RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 SPATA21Q7Z572 469 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 TSEN54Q7Z6J9 526 aaKnown RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 NMD3Q96D46 503 aaKnown RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 SLC25A44Q96H78 314 aaPredicted RBP12.67□□□□□ -0.38
USB1-210ENST00000565151 SLC19A3Q9BZV2 496 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 MAN2C1Q9NTJ4 1040 aa12.67□□□□□ -0.38
USB1-210ENST00000565151 BBIP1A8MTZ0 92 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 BLOC1S5-TXNDC5H3BN57 136 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 FFAR1O14842 300 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 DHHO43323 396 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 OR5F1O95221 314 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 OR6A2O95222 327 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 NPPAP01160 153 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 QDPRP09417 244 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 BMP4P12644 408 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 ZNF16P17020 682 aaPredicted RBP12.66□□□□□ -0.38
USB1-210ENST00000565151 IL2RGP31785 369 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 PTDSS1P48651 473 aaKnown RBP12.66□□□□□ -0.38
USB1-210ENST00000565151 PDLIM4P50479 330 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 MYBPC1Q00872 1141 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 DAG1Q14118 895 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 LAPTM4AQ15012 233 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 DEF8Q6ZN54 512 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 SLC15A3Q8IY34 581 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 MICU2Q8IYU8 434 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 SLC22A24Q8N4F4 322 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
USB1-210ENST00000565151 LIPHQ8WWY8 451 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms