RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZNF841Q6ZN19 808 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 C3orf62Q6ZUJ4 267 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 TMEM151AQ8N4L1 468 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 PYROXD1Q8WU10 500 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 ITLN1Q8WWA0 313 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 AMDHD1Q96NU7 426 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 ZNF649Q9BS31 505 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 RCE1Q9Y256 329 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 GXYLT2A0PJZ3 443 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 NPFFO15130 113 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 UPK3AO75631 287 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 KLHL2O95198 593 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PDYNP01213 254 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 HLA-HP01893 362 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 RPS17P08708 135 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 GFAPP14136 432 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 HPGDP15428 266 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 CHN1P15882 459 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 MYCNOSP40205 109 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 MAGEA12P43365 314 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 VDAC2P45880 294 aaPredicted RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 SELENOPP49908 381 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 ERVS71-1P61550 626 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 TRA2BP62995 288 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 TMEM95Q3KNT9 176 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 CD276Q5ZPR3 534 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 LRFN4Q6PJG9 635 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PAGE2Q7Z2X7 111 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 MTERF4Q7Z6M4 381 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 C1orf52Q8N6N3 182 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PTGR2Q8N8N7 351 aaPredicted RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PNLDC1Q8NA58 520 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 OR4F6Q8NGB9 312 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 CDKL2Q92772 493 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 TMEM246Q9BRR3 403 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 LMF2Q9BU23 707 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 QRSL1Q9H0R6 528 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PIF1Q9H611 641 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 UBQLN4Q9NRR5 601 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 C20orf141Q9NUB4 165 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 ZDHHC8Q9ULC8 765 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 NDRG4Q9ULP0 352 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 PCDHGB4Q9UN71 923 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 HDGFL3Q9Y3E1 203 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 ANGPTL3Q9Y5C1 460 aa8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 TNPO3Q9Y5L0 923 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-204ENST00000563790 FAT1Q14517 4588 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 PLSCR5A0PG75 271 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 TMEM178BH3BS89 294 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 EIF1BO60739 113 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 ALDOBP05062 364 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 IL3P08700 152 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 GSTA2P09210 222 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 TFPIP10646 304 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 TCP1P17987 556 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 EEF1B2P24534 225 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 MAP3K8P41279 467 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 CRATP43155 626 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 QPRTQ15274 297 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 RASA2Q15283 850 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 AANATQ16613 207 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 ZDHHC24Q6UX98 284 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 ZNF572Q7Z3I7 529 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 CTAGE3PQ8IX95 158 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 SYT8Q8NBV8 401 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 OR9K2Q8NGE7 335 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 ARHGDIGQ99819 225 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 NABP2Q9BQ15 211 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 WACQ9BTA9 647 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 C1QTNF3Q9BXJ4 246 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 BRF2Q9HAW0 419 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 SIRT7Q9NRC8 400 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 TXNDC16Q9P2K2 825 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 SLC12A4Q9UP95 1085 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 CARD8Q9Y2G2 431 aa8.5□□□□□ -1.05
HDGFL3-204ENST00000563790 A0A087WV62 115 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 A0A1B0GVI7 797 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 GOLGA6L6A8MZA4 724 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 STX16-NPEPL1H3BU86 382 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 STX16O14662 325 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 ZNF500O60304 480 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 GUCY1B2O75343 617 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 SLC43A1O75387 559 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 CD79AP11912 226 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 GABRA3P34903 492 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 SAA4P35542 130 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 CCNG1P51959 295 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 ARF6P62330 175 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 FAM83EQ2M2I3 478 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 SGO1Q5FBB7 561 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 MROH9Q5TGP6 573 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 PLBD1Q6P4A8 553 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
HDGFL3-204ENST00000563790 CCDC91Q7Z6B0 441 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms