RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 KIAA1143Q96AT1 154 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-203ENST00000563226 VSX1Q9NZR4 365 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-203ENST00000563226 FKBP7Q9Y680 259 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CACNA1CQ13936 2221 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 IGLV3-32A0A0A0MS00 114 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 IGLV1-36A0A0B4J1U3 117 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 LNP1A1A4G5 178 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 SLC16A7O60669 478 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 ALOX5APP20292 161 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 RAB3BP20337 219 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF41P51814 821 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-203ENST00000563226 PUDPQ08623 228 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 CARTPTQ16568 116 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 PRAMEF20Q5VT98 475 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 OR2M3Q8NG83 312 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 OR2Y1Q8NGV0 311 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 MFSD8Q8NHS3 518 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 SETD6Q8TBK2 473 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 NXPE2Q96DL1 559 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 MAP6Q96JE9 813 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 KLHL15Q96M94 604 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 CHCHD2Q9Y6H1 151 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-203ENST00000563226 FREM3P0C091 2139 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 TRAV1-2A0A0B4J238 106 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 SLC22A23A1A5C7 686 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 ACOD1A6NK06 481 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 FAM25AB3EWG3 89 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 FAM25CB3EWG5 89 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 FAM25GB3EWG6 89 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 PIN1P1O15428 100 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF208O43345 1280 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 OPN1LWP04000 364 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 EIF4EP06730 217 aaKnown RBP17.19■□□□□ 0.34
SMPD3-203ENST00000563226 TFPIP10646 304 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 CENPAP49450 140 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 IL18Q14116 193 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 CEP78Q5JTW2 689 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 UNQ9370/PRO34162Q6UXP9 181 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 FAM220AQ7Z4H9 259 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 DTX3Q8N9I9 347 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 OR6S1Q8NH40 331 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 THEM6Q8WUY1 208 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 TTYH2Q9BSA4 534 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 NOX4Q9NPH5 578 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 MRPL22Q9NWU5 206 aaKnown RBP17.19■□□□□ 0.34
SMPD3-203ENST00000563226 IKZF2Q9UKS7 526 aa17.19■□□□□ 0.34
SMPD3-203ENST00000563226 MED12Q93074 2177 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 A0A0B4J203 849 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 GPRIN2O60269 458 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 TRIM3O75382 744 aaPredicted RBP17.18■□□□□ 0.34
SMPD3-203ENST00000563226 HLA-DQA2P01906 255 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 APOA1P02647 267 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 MSX1P28360 303 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 PAMR1Q6UXH9 720 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 WDSUB1Q8N9V3 476 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 DDIT4LQ96D03 193 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 SNX18Q96RF0 628 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 TMEM185BQ9H7F4 350 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 FRRS1LQ9P0K9 344 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF281Q9Y2X9 895 aa17.18■□□□□ 0.34
SMPD3-203ENST00000563226 SLC19A2O60779 497 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 GATBO75879 557 aaKnown RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 KRT8P05787 483 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF883P0CG24 379 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ATF1P18846 271 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SCN1BQ07699 218 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF528Q3MIS6 628 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SLC25A53Q5H9E4 307 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SLC35D2Q76EJ3 337 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SAMD12Q8N8I0 201 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 OR11G2Q8NGC1 345 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 MRGPRX4Q96LA9 322 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 CMKLR1Q99788 373 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SDHAF3Q9NRP4 125 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 SLCO1C1Q9NYB5 712 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 EXTL2Q9UBQ6 330 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 AK6Q9Y3D8 172 aaKnown RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 PCDHGB2Q9Y5G2 931 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 FREM2Q5SZK8 3169 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 A0A1B0GVC2 190 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 A6NIN4 97 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 LIPT2A6NK58 231 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 B4E171 279 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ARL6IP5O75915 188 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 TACSTD2P09758 323 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 IFNGR1P15260 489 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 TSPAN7P41732 249 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 RPS18P62269 152 aaKnown RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ZP4Q12836 540 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ALKBH1Q13686 389 aaKnown RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 MEP1BQ16820 701 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 METAP1DQ6UB28 335 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 H1FNTQ75WM6 255 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 Q8N402 240 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 OR5H6Q8NGV6 325 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 OTOSQ8NHW6 89 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 TRMT10AQ8TBZ6 339 aaKnown RBP17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ASB10Q8WXI3 467 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 KCTD12Q96CX2 325 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms