RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SSX2Q16385 188 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ATF7IP2Q5U623 682 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 TPGS2Q68CL5 300 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ACSM5Q6NUN0 579 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 NIPAL3Q6P499 406 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 METAP1DQ6UB28 335 aaPredicted RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 SYT10Q6XYQ8 523 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 MTERF4Q7Z6M4 381 aaKnown RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 SYVN1Q86TM6 617 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 SPATA24Q86W54 205 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF573Q86YE8 665 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 CENPLQ8N0S6 344 aaPredicted RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 MTURNQ8N3F0 131 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 NECAB1Q8N987 351 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 SUMF2Q8NBJ7 301 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF740Q8NDX6 193 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 OR52B4Q8NGK2 314 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 UCN3Q969E3 161 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 IL22RA2Q969J5 263 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 FBXO32Q969P5 355 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 STARD4Q96DR4 205 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 CELF6Q96J87 481 aaKnown RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 IFT74Q96LB3 600 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 GPA33Q99795 319 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 CHRDL1Q9BU40 450 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 RNF126Q9BV68 326 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF416Q9BWM5 594 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 POLR2J2Q9GZM3 115 aaKnown RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 TMEM117Q9H0C3 514 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 POLR2J3Q9H1A7 115 aaKnown RBP1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 SYNDIG1Q9H7V2 258 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 VCPKMTQ9H867 229 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 RMND5AQ9H871 391 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ECT2Q9H8V3 914 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ETNK2Q9NVF9 386 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 B3GNT2Q9NY97 397 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 UBAP1Q9NZ09 502 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF225Q9UK10 706 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 CACNG2Q9Y698 323 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 MUC6Q6W4X9 2439 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 CHD9Q3L8U1 2897 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 BDP1A6H8Y1 2624 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 MICAL3Q7RTP6 2002 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 DOCK6Q96HP0 2047 aa1.93□□□□□ -2.1
HDGFL3-202ENST00000562702 ASTN1O14525 1302 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 KMT2EQ8IZD2 1858 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TECTAO75443 2155 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 BAZ2BQ9UIF8 2168 aaKnown RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TRBV6-6A0A0A6YYG2 114 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 A0A0U1RQV5 110 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM240BA0A1B0GVZ2 78 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 A8MUA0 341 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 A8MUI8 341 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF879B4DU55 563 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TCP11X1B4DZS4 312 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 SPECC1L-ADORA2AF8WAN1 911 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 KIF2AO00139 706 aaPredicted RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 WRBO00258 174 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 STX7O15400 261 aaKnown RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 NMT2O60551 498 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TBX19O60806 448 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 SPAG6O75602 509 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 UGT2B17O75795 530 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 KLF8O95600 359 aaPredicted RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 PTBP3O95758 552 aaKnown RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TPM3P06753 285 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 ALOX5P09917 674 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 POLR2MP0CAP2 368 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 STAG3L3P0CL85 134 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TROVE2P10155 538 aaKnown RBP eCLIP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CYBAP13498 195 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CYP2F1P24903 491 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 HTR1FP30939 366 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CD80P33681 288 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CHI3L1P36222 383 aaPredicted RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 NUDT1P36639 197 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CTRLP40313 264 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 SYKP43405 635 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TPM4P67936 248 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CSNK1G2P78368 415 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TRDNQ13061 729 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 SNTB2Q13425 540 aaKnown RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 EBI3Q14213 229 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 ARHGAP19Q14CB8 494 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TRIP10Q15642 601 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CEBPEQ15744 281 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 MAPK6Q16659 721 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TATDN3Q17R31 274 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TIGITQ495A1 244 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 SLC36A3Q495N2 470 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 LINC01620Q4KN68 170 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 PRAMEF20Q5VT98 475 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 ERICH5Q6P6B1 374 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM199XQ6PEV8 388 aaPredicted RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 BLOC1S2Q6QNY1 142 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 CENPQQ7L2Z9 268 aaPredicted RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 EFL1Q7Z2Z2 1120 aaKnown RBP1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 C16orf62Q7Z3J2 963 aa1.92□□□□□ -2.1
HDGFL3-202ENST00000562702 TMCO2Q7Z6W1 182 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms