RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 EXO5Q9H790 373 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 MED20Q9H944 212 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 ACOT13Q9NPJ3 140 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 RPRD1BQ9NQG5 326 aaKnown RBP7.69□□□□□ -1.18
TRAF3-209ENST00000560463 INPP5EQ9NRR6 644 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 ASB6Q9NWX5 421 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 TNFRSF10DQ9UBN6 386 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 ERGIC3Q9Y282 383 aa7.69□□□□□ -1.18
TRAF3-209ENST00000560463 TLN1Q9Y490 2541 aaKnown RBP7.69□□□□□ -1.18
TRAF3-209ENST00000560463 BOD1L1Q8NFC6 3051 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 DSPP15924 2871 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SMIM31A0A1B0GVY4 71 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 TMEM129A0AVI4 362 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SLC22A23A1A5C7 686 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 DPPA5A6NC42 116 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CCDC182A6NF36 153 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 A6NHS1 94 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF726A6NNF4 738 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF814B7Z6K7 855 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 J3QRE1 110 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 AQP7O14520 342 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 GPR171O14626 319 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SMAD9O15198 467 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 TRAF3IP2O43734 574 aaPredicted RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CXCL13O43927 109 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CYTIPO60759 359 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SYNGR4O95473 234 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 IGHG1P01857 330 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SBK2P0C263 348 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 GSTT1P30711 240 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CAPZA2P47755 286 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SLC16A1P53985 500 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 BIDP55957 195 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CLDN15P56746 228 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CXADRP78310 365 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 PMP22Q01453 160 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 PIGFQ07326 219 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MELKQ14680 651 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SLC17A1Q14916 467 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 NEDD8Q15843 81 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SYT6Q5T7P8 510 aaPredicted RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 UBE2UQ5VVX9 321 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 ABLIM2Q6H8Q1 611 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CREB3L2Q70SY1 520 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 FCRLAQ7L513 359 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 CHMP1BQ7LBR1 199 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 GPR141Q7Z602 305 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 EGFL6Q8IUX8 553 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 PM20D2Q8IYS1 436 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 ACBD7Q8N6N7 88 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 NANOGP1Q8N7R0 232 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 RBMXL3Q8N7X1 1067 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 OR9K2Q8NGE7 335 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 OR51G2Q8NGK0 314 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 OR9Q1Q8NGQ5 310 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 FAR1Q8WVX9 515 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 EXTL1Q92935 676 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 KISS1RQ969F8 398 aaPredicted RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 PNPLA2Q96AD5 504 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SARAFQ96BY9 339 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 INTS12Q96CB8 462 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MRPL48Q96GC5 212 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MNTQ99583 582 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 TIMP4Q99727 224 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MND1Q9BWT6 205 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MRPL13Q9BYD1 178 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SRXN1Q9BYN0 137 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 FAM192AQ9GZU8 254 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 NUAK2Q9H093 628 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SYT4Q9H2B2 425 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 HEATR1Q9H583 2144 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 RNF122Q9H9V4 155 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 PLSCR2Q9NRY7 297 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 MCTS1Q9ULC4 181 aaKnown RBP7.68□□□□□ -1.18
TRAF3-209ENST00000560463 B9D1Q9UPM9 204 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 COMMD3-BMI1R4GMX3 469 aa7.68□□□□□ -1.18
TRAF3-209ENST00000560463 IGKV3D-15A0A087WSY6 115 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 SLC35F4A4IF30 521 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR14I1A6ND48 311 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF716A6NP11 495 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF99A8MXY4 864 aaPredicted RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 C1QTNF9BB2RNN3 333 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 H0YC42 278 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 MYL12BO14950 172 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 TRMUO75648 421 aaKnown RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 PDGFAP04085 211 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 GYPBP06028 91 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR2T7P0C7T2 308 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 PGA4P0DJD7 388 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 PGA3P0DJD8 388 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 CLUP10909 449 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 CLRN1P58418 232 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 HSF2Q03933 536 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 GLO1Q04760 184 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 RASGEF1BQ0VAM2 473 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms