RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 A0A1W2PPW3 197 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 BLOC1S5-TXNDC5H3BN57 136 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 KPNA4O00629 521 aaPredicted RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 PHF1O43189 567 aaPredicted RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 IGHG1P01857 330 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 MT-ND5P03915 603 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 OPN1SWP03999 348 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 NR2C1P13056 603 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 PCGF2P35227 344 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 GUCA1AP43080 201 aaPredicted RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 GIPRP48546 466 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 TAS2R41P59536 307 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 MAPRE2Q15555 327 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 DUSP7Q16829 419 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 SLC36A2Q495M3 483 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 TTMPQ5BVD1 217 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 ZNF786Q8N393 782 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 OR10A6Q8NH74 314 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 ADAMTS16Q8TE57 1224 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 HPS1Q92902 700 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 ZNF837Q96EG3 531 aaPredicted RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 SLC25A44Q96H78 314 aaPredicted RBP10.88□□□□□ -0.67
SNX1-209ENST00000559961 DOK1Q99704 481 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 BPESC1Q9GZL8 116 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 NELFAQ9H3P2 528 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 IKZF5Q9H5V7 419 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 CDH20Q9HBT6 801 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 SLC52A3Q9NQ40 469 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 SLC7A8Q9UHI5 535 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 DUSP13Q9UII6 198 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 SLC7A7Q9UM01 511 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 TLN2Q9Y4G6 2542 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 IQCMA0A1B0GVH7 501 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 MGRN1O60291 552 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 NPPAP01160 153 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 APEX1P27695 318 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 THBS2P35442 1172 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 GLRXP35754 106 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 ZP4Q12836 540 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 SCGB2A2Q13296 93 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 ZNF74Q16587 644 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 NKPD1Q17RQ9 610 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 VMACQ2NL98 169 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 FAM120AOSQ5T036 256 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 UNQ6126/PRO20091Q6UXV3 157 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 LSRQ86X29 649 aaPredicted RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 PTOV1Q86YD1 416 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 C10orf111Q8N326 155 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 SLC22A24Q8N4F4 322 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 LINC01356Q8N9X3 169 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 PCYOX1LQ8NBM8 494 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 OR6T1Q8NGN1 323 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 SNX33Q8WV41 574 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 MRPL24Q96A35 216 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 MSI2Q96DH6 328 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 POLR2J2Q9GZM3 115 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 POLR2J3Q9H1A7 115 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 KAT8Q9H7Z6 458 aaKnown RBP10.87□□□□□ -0.67
SNX1-209ENST00000559961 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 GID8Q9NWU2 228 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
SNX1-209ENST00000559961 IGHV4-61A0A0C4DH41 118 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 GMNCA6NCL1 334 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 LRRN3E7EW58 273 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 DHHO43323 396 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 SERPINA5P05154 406 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 QDPRP09417 244 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 DRD4P21917 467 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 GIFP27352 417 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 RAD52P43351 418 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 DAP3P51398 398 aaKnown RBP10.86□□□□□ -0.67
SNX1-209ENST00000559961 RAB39AQ14964 217 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 TBC1D28Q2M2D7 210 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
SNX1-209ENST00000559961 TMEM154Q6P9G4 183 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 LINC00114Q6XXX2 140 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 SLC16A14Q7RTX9 510 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 COMTD1Q86VU5 262 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 C11orf40Q8WZ69 217 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 LZICQ8WZA0 190 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 TPK1Q9H3S4 243 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 SH3GLB1Q9Y371 365 aa10.86□□□□□ -0.67
SNX1-209ENST00000559961 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 BBIP1A8MTZ0 92 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 TPD52L2O43399 206 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 TPST2O60704 377 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 EDF1O60869 148 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 LCKP06239 509 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 ZNF35P13682 527 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 ZNF14P17017 642 aaPredicted RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 FUT1P19526 365 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms