RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 APOBEC3AP31941 199 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 TTKP33981 857 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RPL4P36578 427 aaKnown RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 SLC9A3P48764 834 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PTH2RP49190 550 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FABP6P51161 128 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ZNF84P51523 738 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 UGT2B15P54855 530 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FOXG1P55316 489 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 RAP1BP61224 184 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RAP1AP62834 184 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ARF1P84077 181 aaKnown RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 SLC25A3Q00325 362 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 GALK2Q01415 458 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PRKCDQ05655 676 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LTBQ06643 244 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RPL18Q07020 188 aaKnown RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 LGALS3BPQ08380 585 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 CD47Q08722 323 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 DGCR6Q14129 220 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LAPTM4AQ15012 233 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RAB35Q15286 201 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PGGHGQ32M88 737 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SLC36A2Q495M3 483 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NRN1LQ496H8 165 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FGD3Q5JSP0 725 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 Q5PR19 223 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FAM205BPQ63HN1 556 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SEZ6L2Q6UXD5 910 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 UNQ6126/PRO20091Q6UXV3 157 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ZNF813Q6ZN06 617 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 MBOAT2Q6ZWT7 520 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SLC46A3Q7Z3Q1 461 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 YTHDF3Q7Z739 585 aaKnown RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 DPPA2Q7Z7J5 298 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NRMQ8IXM6 262 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 DEFB107AQ8IZN7 70 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FITM2Q8N6M3 262 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RNF148Q8N7C7 305 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 WDR31Q8NA23 367 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 OR4F15Q8NGB8 312 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 OR51A7Q8NH64 312 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PFN4Q8NHR9 129 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 BCAS4Q8TDM0 211 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LIPHQ8WWY8 451 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 BCL2L2Q92843 193 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 PYURFQ96I23 114 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NSL1Q96IY1 281 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 TXNDC15Q96J42 360 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LRGUKQ96M69 825 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RBP7Q96R05 134 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ZNF347Q96SE7 839 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FOXB1Q99853 325 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 DHRS9Q9BPW9 319 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PRSS27Q9BQR3 290 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 GRIP2Q9C0E4 1043 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LRMDAQ9H2I8 198 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 MUC13Q9H3R2 512 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 BARX1Q9HBU1 254 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 CA10Q9NS85 328 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 CBLN4Q9NTU7 201 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 C20orf141Q9NUB4 165 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ZNF701Q9NV72 531 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 NPAP1Q9NZP6 1156 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 GRHPRQ9UBQ7 328 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 A4GNTQ9UNA3 340 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 MOKQ9UQ07 419 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 AURKCQ9UQB9 309 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 TMEM5Q9Y2B1 443 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 HIF3AQ9Y2N7 669 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SPEF1Q9Y4P9 236 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SNX13Q9Y5W8 968 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ATP23Q9Y6H3 246 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 ENPP4Q9Y6X5 453 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PMF1-BGLAPU3KQ54 211 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PDZD2O15018 2839 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 F8P00451 2351 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 FREM1Q5H8C1 2179 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 A0A087WUU8 490 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 IGHV1-18A0A0C4DH31 117 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 IQCMA0A1B0GVH7 501 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SLC22A23A1A5C7 686 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 E7EQL1 145 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RNF223E7ERA6 249 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ATP6V1G2-DDX39BF2Z307 99 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 J3KTA2 159 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 hCG_2039718K7EN88 272 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 OVOL3O00110 214 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 FFAR1O14842 300 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ARPC2O15144 300 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 DHHO43323 396 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 AHCYL1O43865 530 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 KRT36O76013 467 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SEC14L2O76054 403 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 GADD45GO95257 159 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 LYPD3O95274 346 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 IGLV1-44P01699 117 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 HLA-HP01893 362 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SOD3P08294 240 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms