RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 CADP27708 2225 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ZNF587BE7ETH6 402 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 H7C1C5 153 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 OR10H3O60404 316 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 CCNB2O95067 398 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 OR6A2O95222 327 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 CST1P01037 141 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ACADSP16219 412 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 IL32P24001 234 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 PEX19P40855 299 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 CTXN1P60606 82 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 RPL27P61353 136 aaKnown RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 LCN6P62502 163 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 TUBA1BP68363 451 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 TUBA4AP68366 448 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 TLE4Q04727 773 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 TSPAN31Q12999 210 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 MICAQ29983 383 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 PTCHD4Q6ZW05 846 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 TUBA1AQ71U36 451 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ZNF627Q7L945 461 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 MYPOPQ86VE0 399 aaPredicted RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 AQP11Q8NBQ7 271 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 C1orf162Q8NEQ5 155 aaPredicted RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 STEAP2Q8NFT2 490 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 FGFBP3Q8TAT2 258 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 NRGNQ92686 78 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 POP5Q969H6 163 aaKnown RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 RASD2Q96D21 266 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 LRRC46Q96FV0 321 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 SLC25A44Q96H78 314 aaPredicted RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 Q96M85 177 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ADAD1Q96M93 576 aaKnown RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 ZNF75AQ96N20 296 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 MED18Q9BUE0 208 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 HDHD5Q9BXW7 423 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 DGCR6LQ9BY27 220 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 OR52D1Q9H346 318 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 DENND2DQ9H6A0 471 aaPredicted RBP10.01□□□□□ -0.81
SNX1-204ENST00000559061 EGLN3Q9H6Z9 239 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 REEP1Q9H902 201 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 SLC17A5Q9NRA2 495 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 RASSF1Q9NS23 344 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 ARMC1Q9NVT9 282 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 GLTPQ9NZD2 209 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 UPB1Q9UBR1 384 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 REV1Q9UBZ9 1251 aa10.01□□□□□ -0.81
SNX1-204ENST00000559061 A0A096LPE4 126 aa10□□□□□ -0.81
SNX1-204ENST00000559061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10□□□□□ -0.81
SNX1-204ENST00000559061 A0A1W2PPZ6 126 aa10□□□□□ -0.81
SNX1-204ENST00000559061 A0A1W2PRG6 482 aa10□□□□□ -0.81
SNX1-204ENST00000559061 ARRDC5A6NEK1 342 aa10□□□□□ -0.81
SNX1-204ENST00000559061 DPRXA6NFQ7 191 aa10□□□□□ -0.81
SNX1-204ENST00000559061 NDUFB2O95178 105 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SLC2A10O95528 541 aa10□□□□□ -0.81
SNX1-204ENST00000559061 TXNDC12O95881 172 aa10□□□□□ -0.81
SNX1-204ENST00000559061 BCL10O95999 233 aa10□□□□□ -0.81
SNX1-204ENST00000559061 PLAUP00749 431 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SCG5P05408 212 aa10□□□□□ -0.81
SNX1-204ENST00000559061 CD14P08571 375 aa10□□□□□ -0.81
SNX1-204ENST00000559061 PPP3CBP16298 524 aa10□□□□□ -0.81
SNX1-204ENST00000559061 CDH2P19022 906 aaPredicted RBP10□□□□□ -0.81
SNX1-204ENST00000559061 PRKACGP22612 351 aa10□□□□□ -0.81
SNX1-204ENST00000559061 CSNK1A1P48729 337 aa10□□□□□ -0.81
SNX1-204ENST00000559061 MYBPC1Q00872 1141 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SPOCK1Q08629 439 aa10□□□□□ -0.81
SNX1-204ENST00000559061 ATP6AP1Q15904 470 aa10□□□□□ -0.81
SNX1-204ENST00000559061 TBRG1Q3YBR2 411 aa10□□□□□ -0.81
SNX1-204ENST00000559061 ANKDD1AQ495B1 522 aa10□□□□□ -0.81
SNX1-204ENST00000559061 TIMM23BQ5SRD1 257 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SLC25A47Q6Q0C1 308 aa10□□□□□ -0.81
SNX1-204ENST00000559061 KLHL17Q6TDP4 642 aa10□□□□□ -0.81
SNX1-204ENST00000559061 WFDC8Q8IUA0 241 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SYT14Q8NB59 555 aa10□□□□□ -0.81
SNX1-204ENST00000559061 OR10G2Q8NGC3 310 aa10□□□□□ -0.81
SNX1-204ENST00000559061 OR4Q3Q8NH05 313 aa10□□□□□ -0.81
SNX1-204ENST00000559061 OR52N5Q8NH56 324 aa10□□□□□ -0.81
SNX1-204ENST00000559061 LILRB1Q8NHL6 650 aaPredicted RBP10□□□□□ -0.81
SNX1-204ENST00000559061 FANK1Q8TC84 345 aa10□□□□□ -0.81
SNX1-204ENST00000559061 GNPDA2Q8TDQ7 276 aa10□□□□□ -0.81
SNX1-204ENST00000559061 PYDC1Q8WXC3 89 aa10□□□□□ -0.81
SNX1-204ENST00000559061 MCHR2Q969V1 340 aa10□□□□□ -0.81
SNX1-204ENST00000559061 ZNF566Q969W8 418 aa10□□□□□ -0.81
SNX1-204ENST00000559061 NABP1Q96AH0 204 aa10□□□□□ -0.81
SNX1-204ENST00000559061 SAMD8Q96LT4 415 aa10□□□□□ -0.81
SNX1-204ENST00000559061 FEVQ99581 238 aa10□□□□□ -0.81
SNX1-204ENST00000559061 TMEM204Q9BSN7 226 aa10□□□□□ -0.81
SNX1-204ENST00000559061 POLDIP3Q9BY77 421 aaKnown RBP10□□□□□ -0.81
SNX1-204ENST00000559061 DNAJB9Q9UBS3 223 aa10□□□□□ -0.81
SNX1-204ENST00000559061 TACC2O95359 2948 aa10□□□□□ -0.81
SNX1-204ENST00000559061 ARPC4-TTLL3A0A0A6YYG9 625 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 TEX13CA0A0J9YWL9 993 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 OR6C65A6NJZ3 312 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ZNF99A8MXY4 864 aaPredicted RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 BHLHE40O14503 412 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 AKAP8O43823 692 aaKnown RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 PPP1R3DO95685 299 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms