RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 VSX1Q9NZR4 365 aaPredicted RBP16.05■□□□□ 0.16
CLPX-203ENST00000558958 CLEC4AQ9UMR7 237 aa16.05■□□□□ 0.16
CLPX-203ENST00000558958 RCE1Q9Y256 329 aa16.05■□□□□ 0.16
CLPX-203ENST00000558958 FAM215AQ9Y5M1 114 aa16.05■□□□□ 0.16
CLPX-203ENST00000558958 AKAP8O43823 692 aaKnown RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 AHCYL1O43865 530 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 ENTPD6O75354 484 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 RENP00797 406 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 IGHG1P01857 330 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 PGA4P0DJD7 388 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 PGA3P0DJD8 388 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 SMN1Q16637 294 aaKnown RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 C6orf141Q5SZD1 244 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 C1orf185Q5T7R7 199 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 MEDAGQ5VYS4 303 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 DOLPP1Q86YN1 238 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 TMEM123Q8N131 208 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 C9orf106Q8NAJ2 232 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 ZNF566Q969W8 418 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 GMPPAQ96IJ6 420 aaPredicted RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 Q96MT0 163 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 ZNF582Q96NG8 517 aaPredicted RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 ALG12Q9BV10 488 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 TP63Q9H3D4 680 aaPredicted RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 CLN6Q9NWW5 311 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 DNAJC27Q9NZQ0 273 aa16.04■□□□□ 0.16
CLPX-203ENST00000558958 NOSIPQ9Y314 301 aaKnown RBP16.04■□□□□ 0.16
CLPX-203ENST00000558958 SLC22A23A1A5C7 686 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 MBD3L4A6NDZ8 208 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 MBD3L3A6NE82 208 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 MBD3L5A6NJ08 208 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 CENPBD1B2RD01 187 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SELENOPP49908 381 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SLC25A1P53007 311 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 NXNL2Q5VZ03 156 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 NIPAL3Q6P499 406 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SEM1Q6ZVN7 128 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 AAED1Q7RTV5 226 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SYT14Q8NB59 555 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 BBS1Q8NFJ9 593 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 MBD3L2Q8NHZ7 208 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 OTULINQ96BN8 352 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 TM9SF2Q99805 663 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SYT4Q9H2B2 425 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 RPRD1BQ9NQG5 326 aaKnown RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 ZGRF1Q86YA3 2104 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SHANK1Q9Y566 2161 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SH3D21A4FU49 640 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 SS18L1O75177 396 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 FMO3P31513 532 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 DBPQ10586 325 aaPredicted RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 GUSBP1Q15486 140 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 HIST3H3Q16695 136 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 CARD17Q5XLA6 110 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 OR2A2Q6IF42 318 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 UGT2A3Q6UWM9 527 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 NOXO1Q8NFA2 376 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 OR9Q1Q8NGQ5 310 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 NMD3Q96D46 503 aaKnown RBP16.03■□□□□ 0.16
CLPX-203ENST00000558958 TSSK2Q96PF2 358 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 PARPBPQ9NWS1 579 aa16.03■□□□□ 0.16
CLPX-203ENST00000558958 M0R3G1 203 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 DCTN6O00399 190 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 PRODHO43272 600 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 MRPL33O75394 65 aaKnown RBP16.02■□□□□ 0.15
CLPX-203ENST00000558958 CLUP10909 449 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 SPI1P17947 270 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 SLC2A5P22732 501 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 AGTR1P30556 359 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 CLRN1P58418 232 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 CXCR4P61073 352 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 C3P1Q6ZMU1 363 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 GID4Q8IVV7 300 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 C20orf196Q8IYI0 205 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 OR6V1Q8N148 313 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 ZNF786Q8N393 782 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 RPRMLQ8N4K4 120 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 TMEM54Q969K7 222 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 RBP7Q96R05 134 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 NUAK2Q9H093 628 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 ASB6Q9NWX5 421 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 H2AFY2Q9P0M6 372 aaPredicted RBP16.02■□□□□ 0.15
CLPX-203ENST00000558958 FOXD3Q9UJU5 478 aaPredicted RBP16.02■□□□□ 0.15
CLPX-203ENST00000558958 TINAGQ9UJW2 476 aa16.02■□□□□ 0.15
CLPX-203ENST00000558958 RP1L1Q8IWN7 2480 aaPredicted RBP16.01■□□□□ 0.15
CLPX-203ENST00000558958 SLC43A1O75387 559 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 GYPBP06028 91 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 TIMP3P35625 211 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 CSNK1A1P48729 337 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 NUDT6P53370 316 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 CDH11P55287 796 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 CSNK2BP67870 215 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 THEM4Q5T1C6 240 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 MEPCEQ7L2J0 689 aaKnown RBP16.01■□□□□ 0.15
CLPX-203ENST00000558958 NUFIP2Q7Z417 695 aaKnown RBP16.01■□□□□ 0.15
CLPX-203ENST00000558958 ZBTB46Q86UZ6 589 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 GCNT2Q8N0V5 402 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 FNDC8Q8TC99 324 aa16.01■□□□□ 0.15
CLPX-203ENST00000558958 RFKQ969G6 155 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms