RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SMAP2Q8WU79 429 aaPredicted RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 GTPBP3Q969Y2 492 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 TRMT61AQ96FX7 289 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 C7orf34Q96L11 122 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ALKBH3Q96Q83 286 aaPredicted RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 ZNF347Q96SE7 839 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 KCNS3Q9BQ31 491 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 ULBP2Q9BZM5 246 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 IL1RAPQ9NPH3 570 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 INIPQ9NRY2 104 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 C20orf141Q9NUB4 165 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 MED29Q9NX70 200 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 GLTPQ9NZD2 209 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 NDUFAF4Q9P032 175 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ACTR3BQ9P1U1 418 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 PRPF19Q9UMS4 504 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 AKAP6Q13023 2319 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 TACC2O95359 2948 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 A0A1W2PR80 420 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 EFCAB9A8MZ26 197 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 J3KTA2 159 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 ARPC2O15144 300 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 KRT36O76013 467 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 PRSS23O95084 383 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 FARS2O95363 451 aaKnown RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 CRYAAP02489 173 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 T-ENOLP0DO92 83 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 PAX1P15863 534 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 ACADSP16219 412 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 PTNP21246 168 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 IFNGR2P38484 337 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 AQP2P41181 271 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 GUCA1AP43080 201 aaPredicted RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 CLRN1P58418 232 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 NKX6-1P78426 367 aaPredicted RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 LGALS3BPQ08380 585 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 TRIM25Q14258 630 aaKnown RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 HIKESHIQ53FT3 197 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 ALG10Q5BKT4 473 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 AGAP6Q5VW22 663 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 FAM205BPQ63HN1 556 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 ZNF544Q6NX49 715 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 LINGO2Q7L985 606 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 DHFR2Q86XF0 187 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 FAM156AQ8NDB6 213 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 LILRB1Q8NHL6 650 aaPredicted RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 SLC7A13Q8TCU3 470 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 TMEM54Q969K7 222 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 RBP7Q96R05 134 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 DHRS9Q9BPW9 319 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 KATNB1Q9BVA0 655 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 C1QTNF6Q9BXI9 259 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 MRPL13Q9BYD1 178 aaKnown RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 GSX2Q9BZM3 304 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 TXNIPQ9H3M7 391 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 MAN2C1Q9NTJ4 1040 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 TAS2R1Q9NYW7 299 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 NPAP1Q9NZP6 1156 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 RHCGQ9UBD6 479 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 CRNNQ9UBG3 495 aaPredicted RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 FBXO9Q9UK97 447 aaPredicted RBP7.41□□□□□ -1.22
TPM1-213ENST00000558400 FBXL3Q9UKT7 428 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 ACANP16112 2415 aa7.41□□□□□ -1.22
TPM1-213ENST00000558400 PRR14LQ5THK1 2151 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 A0A096LPE4 126 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 A0A1W2PPZ6 126 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 A6NIZ1 184 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 SHISA9B4DS77 424 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 DHHO43323 396 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 AHCYL1O43865 530 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 GADD45GO95257 159 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 IGKV3-15P01624 115 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 F13BP05160 661 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 FABP3P05413 133 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 QDPRP09417 244 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 DANCRP0C864 163 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 PGA4P0DJD7 388 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 PGA3P0DJD8 388 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 OR8G3PP0DMU2 310 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
TPM1-213ENST00000558400 MSX2P35548 267 aaPredicted RBP7.4□□□□□ -1.22
TPM1-213ENST00000558400 RASSF2P50749 326 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 ZNF84P51523 738 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 CTXN1P60606 82 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 RAP1BP61224 184 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 RPL27P61353 136 aaKnown RBP7.4□□□□□ -1.22
TPM1-213ENST00000558400 RPS4XP62701 263 aaKnown RBP7.4□□□□□ -1.22
TPM1-213ENST00000558400 RAP1AP62834 184 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 CHRNB3Q05901 458 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 HIST3H3Q16695 136 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 ZBED5Q49AG3 693 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 THEM4Q5T1C6 240 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 PODNL1Q6PEZ8 512 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 ZNF813Q6ZN06 617 aa7.4□□□□□ -1.22
TPM1-213ENST00000558400 TSEN54Q7Z6J9 526 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms