RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 CHCHD4Q8N4Q1 142 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 POU2F2P09086 479 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 RPL22L1Q6P5R6 122 aaKnown RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 CLEC14AQ86T13 490 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 NENFQ9UMX5 172 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 UMAD1C9J7I0 102 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 C1orf105O95561 183 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 DEFA4P12838 97 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 SLC35A2P78381 396 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 MDGA2Q7Z553 956 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 PELI2Q9HAT8 420 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 FBXL4Q9UKA2 621 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 A0A087WV62 115 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 ZNF623O75123 536 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 HPNP05981 417 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 ATP1B3P54709 279 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 HBG1P69891 147 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 HBG2P69892 147 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 KIAA0907Q7Z7F0 614 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 NUDT8Q8WV74 236 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 CDCP1Q9H5V8 836 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 CER1O95813 267 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 PIGTQ969N2 578 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 NARFLQ9H6Q4 476 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 LANCL2Q9NS86 450 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 CSAG2Q9Y5P2 127 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 OR6C68A6NDL8 312 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 H0YGG7 62 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 ZNF728P0DKX0 622 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 CD46P15529 392 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 GNB2P62879 340 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 ZMAT1Q5H9K5 638 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 YOD1Q5VVQ6 348 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 TMEM268Q5VZI3 342 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 OR51S1Q8NGJ8 323 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 ANKRD19PQ9H560 264 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 INPP5EQ9NRR6 644 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 F6UZH7 168 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 OR4C5Q8NGB2 326 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 LKAAEAR1Q8TD35 194 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 P2RY10O00398 339 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 GFRA2O00451 464 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 TCAPO15273 167 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 AKR7A2O43488 359 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 GCAP28676 217 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 HLA-FP30511 346 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 LIPAP38571 399 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 SLC6A8P48029 635 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 GABRA4P48169 554 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 F2RL1P55085 397 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 TIPARPQ7Z3E1 657 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 ZNF566Q969W8 418 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 SLC6A20Q9NP91 592 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 KCNIP2Q9NS61 270 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 RYDENQ9NUL5 291 aaKnown RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 MED9Q9NWA0 146 aa12.9□□□□□ -0.34
SPG11-210ENST00000558319 COL2A1P02458 1487 aaPredicted RBP12.9□□□□□ -0.34
SPG11-210ENST00000558319 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.35
SPG11-210ENST00000558319 IGHV3-15A0A0B4J1V0 119 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 TPOP07202 933 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 CHRNB4P30926 498 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 PIGAP37287 484 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 PM20D1Q6GTS8 502 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 Q6ZTK2 550 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 VASH2Q86V25 355 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 TRABD2BA6NFA1 517 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 ZNF891A8MT65 544 aaPredicted RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 SLC35D1Q9NTN3 355 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 CD80P33681 288 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 SLC46A3Q7Z3Q1 461 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms