RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 TSPAN31Q12999 210 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 MELKQ14680 651 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 PPA1Q15181 289 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 HIST3H3Q16695 136 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 PHYHD1Q5SRE7 291 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 C9orf135Q5VTT2 229 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 FAM205BPQ63HN1 556 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 ZNF770Q6IQ21 691 aaPredicted RBP10.56□□□□□ -0.72
CDK12-203ENST00000558240 PGBD2Q6P3X8 592 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 SMARCD3Q6STE5 483 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 OR1K1Q8NGR3 316 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 MAGEE2Q8TD90 523 aaPredicted RBP10.56□□□□□ -0.72
CDK12-203ENST00000558240 GPX7Q96SL4 187 aaPredicted RBP10.56□□□□□ -0.72
CDK12-203ENST00000558240 SLC17A5Q9NRA2 495 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 RASSF1Q9NS23 344 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 VNN3Q9NY84 501 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 DNAJB9Q9UBS3 223 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 ZNF346Q9UL40 294 aaKnown RBP10.56□□□□□ -0.72
CDK12-203ENST00000558240 U3KQV3 271 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
CDK12-203ENST00000558240 PLCE1Q9P212 2302 aa10.56□□□□□ -0.72
CDK12-203ENST00000558240 NAV2Q8IVL1 2488 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ARRDC5A6NEK1 342 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 A6NIZ1 184 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 DEFB108AA8MXU0 73 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ZNF99A8MXY4 864 aaPredicted RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 GNGT2O14610 69 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 NR2C1P13056 603 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 CDH2P19022 906 aaPredicted RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 ERFP50548 548 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ZNF133P52736 654 aaPredicted RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 CLRN1P58418 232 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 RAP1BP61224 184 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 RAP1AP62834 184 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 RUNX1T1Q06455 604 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 PPP1R8Q12972 351 aaKnown RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 CCNIQ14094 377 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 CEACAM16Q2WEN9 425 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 RFX4Q33E94 735 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 BEX5Q5H9J7 111 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ANKRD16Q6P6B7 361 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 DPY19L2P2Q6ZN68 376 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ZNF627Q7L945 461 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 IGFN1Q86VF2 1251 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 WFDC8Q8IUA0 241 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ARIH2OSQ8N7S6 290 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 WDR31Q8NA23 367 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 OR9Q2Q8NGE9 314 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 FNDC8Q8TC99 324 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 BCL2L2Q92843 193 aaPredicted RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 ZNF837Q96EG3 531 aaPredicted RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 TSPAN32Q96QS1 320 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ALG12Q9BV10 488 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 KATNB1Q9BVA0 655 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 POLDIP3Q9BY77 421 aaKnown RBP10.55□□□□□ -0.72
CDK12-203ENST00000558240 ULBP2Q9BZM5 246 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 OBP2BQ9NPH6 170 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 NRIP3Q9NQ35 241 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 ARMC1Q9NVT9 282 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 GRHPRQ9UBQ7 328 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 MGAT4BQ9UQ53 548 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 POFUT2Q9Y2G5 429 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 AMDHD2Q9Y303 409 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 AP4S1Q9Y587 144 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 SLC25A15Q9Y619 301 aa10.55□□□□□ -0.72
CDK12-203ENST00000558240 RTTNQ86VV8 2226 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 SIAH2O43255 324 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 AHCYL1O43865 530 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 DSCAMO60469 2012 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 DEAF1O75398 565 aaPredicted RBP10.54□□□□□ -0.72
CDK12-203ENST00000558240 WNT11O96014 354 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 GASTP01350 101 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 HRGP04196 525 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 QDPRP09417 244 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 APEHP13798 732 aaKnown RBP10.54□□□□□ -0.72
CDK12-203ENST00000558240 HOXC12P31275 282 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 ACVR1BP36896 505 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 NR1H2P55055 460 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 FXYD6P3P58550 94 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 ACTR3P61158 418 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 ERVK-25P63136 954 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 ARF1P84077 181 aaKnown RBP10.54□□□□□ -0.72
CDK12-203ENST00000558240 TOP3AQ13472 1001 aaPredicted RBP10.54□□□□□ -0.72
CDK12-203ENST00000558240 TBRG1Q3YBR2 411 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 GPR139Q6DWJ6 353 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 RPL13AP3Q6NVV1 102 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 FAM122BQ7Z309 247 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 CCDC36Q8IYA8 594 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 SYT14Q8NB59 555 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 AQP11Q8NBQ7 271 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 NOXO1Q8NFA2 376 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 OR10G2Q8NGC3 310 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 OR52N5Q8NH56 324 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 ZNF519Q8TB69 540 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 GIPC3Q8TF64 312 aa10.54□□□□□ -0.72
CDK12-203ENST00000558240 HDAC2Q92769 488 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms