RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 LRP5LA4QPB2 252 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 URADA6NGE7 173 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 SLC22A20A6NK97 555 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 NPIPA7E9PJI5 369 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 SOCS3O14543 225 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZNF195O14628 629 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TP53I11O14683 189 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 IDH3BO43837 385 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 AHCYL1O43865 530 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 KIF5CO60282 957 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CST8O60676 142 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 GALR3O60755 368 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZNF354AO60765 605 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 RAMP1O60894 148 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 SLC16A8O95907 504 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TGM6O95932 706 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 GOT2P00505 430 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 C1QAP02745 245 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CATP04040 527 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 CSN3P07498 182 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 NPIPA8P0DM63 369 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 IL11P20809 199 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 AADACP22760 399 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 PSMB4P28070 264 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CYLC1P35663 651 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 CDK9P50750 372 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 FABP6P51161 128 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZNF140P52738 457 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 CTBP2P56545 445 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CCZ1BP86790 482 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CCZ1P86791 482 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 SRSF9Q13242 221 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD8-212ENST00000557329 ITIH4Q14624 930 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TSC22D1Q15714 1073 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 KLHL38Q2WGJ6 581 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZNF658BQ4V348 819 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 OR2A2Q6IF42 318 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 FAHD2BQ6P2I3 314 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 ANGPTL8Q6UXH0 198 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 RBPMS2Q6ZRY4 209 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZBTB49Q6ZSB9 765 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZNF571Q7Z3V5 609 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 C17orf64Q86WR6 236 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 PRR22Q8IZ63 422 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 FAM83FQ8NEG4 500 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 OR4L1Q8NH43 312 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZPLD1Q8TCW7 415 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 PROX1Q92786 737 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TADA1Q96BN2 335 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 PPWD1Q96BP3 646 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 FAHD2AQ96GK7 314 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 RILPQ96NA2 401 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ZFP3Q96NJ6 502 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 MUS81Q96NY9 551 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CPNE1Q99829 537 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 DCTN5Q9BTE1 182 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ANP32EQ9BTT0 268 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CARD6Q9BX69 1037 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 RABEP2Q9H5N1 569 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 METTL7AQ9H8H3 244 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 GPN1Q9HCN4 374 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 NGBQ9NPG2 151 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 FANCFQ9NPI8 374 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CCDC177Q9NQR7 707 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 FAM114A2Q9NRY5 505 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 DDX28Q9NUL7 540 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 NLE1Q9NVX2 485 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 MED29Q9NX70 200 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 QPCTLQ9NXS2 382 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 NUDT4Q9NZJ9 180 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CNIH4Q9P003 139 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 WDR83OSQ9Y284 106 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 MRPS33Q9Y291 106 aaKnown RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 PPP2R2CQ9Y2T4 447 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TMED3Q9Y3Q3 217 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 SPACA6W5XKT8 324 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 NCKAP5O14513 1909 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 ROS1P08922 2347 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TRBV5-4A0A0C4DH59 114 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 FRG2CA6NGY1 282 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 SLC1A7O00341 560 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 PIN1P1O15428 100 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 ZBTB14O43829 449 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 GMFGO60234 142 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 TNFSF13O75888 250 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 CLDN9O95484 217 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 ACTL6AO96019 429 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
CHD8-212ENST00000557329 TPSB2P20231 275 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 IL32P24001 234 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 MPZP25189 248 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 PTPN6P29350 595 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 RPL22P35268 128 aaKnown RBP3.09□□□□□ -1.91
CHD8-212ENST00000557329 HSD17B2P37059 387 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 OPRL1P41146 370 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 FBXW4P57775 412 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 RPP38P78345 283 aaKnown RBP3.09□□□□□ -1.91
CHD8-212ENST00000557329 DLK1P80370 383 aa3.09□□□□□ -1.91
CHD8-212ENST00000557329 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms