RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DNAJC22Q8N4W6 341 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 COMMD1Q8N668 190 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 AQP11Q8NBQ7 271 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLC7A13Q8TCU3 470 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ADAMTS15Q8TE58 950 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PHF10Q8WUB8 498 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 MITD1Q8WV92 249 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C16orf58Q96GQ5 468 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SMIM10Q96HG1 83 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLC35G5Q96KT7 338 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 COL21A1Q96P44 957 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR5M11Q96RB7 305 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ALOXE3Q9BYJ1 711 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PPIL3Q9H2H8 161 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 POFUT1Q9H488 388 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C2orf42Q9NWW7 574 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PGPEP1Q9NXJ5 209 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CD207Q9UJ71 328 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PILRAQ9UKJ1 303 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ING4Q9UNL4 249 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TPRKBQ9Y3C4 175 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 HEBP2Q9Y5Z4 205 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 COLEC10Q9Y6Z7 277 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZAR1LA6NP61 321 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF891A8MT65 544 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 PEX12O00623 359 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SIAH2O43255 324 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 FAM20BO75063 409 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 MED26O95402 600 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 THBS1P07996 1170 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 IL12BP29460 328 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TGFBR1P36897 503 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 LSSP48449 732 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 UBE2KP61086 200 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 HERV-K104P63124 156 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 RPL19P84098 196 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 QPRTQ15274 297 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SPDYE7PQ495Y7 208 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SLC35F1Q5T1Q4 408 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TFAP2EQ6VUC0 442 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 Q6ZS52 159 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 Q7L0L9 218 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 MOGAT3Q86VF5 341 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 VWA5B2Q8N398 1253 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SLC44A3Q8N4M1 653 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 XAGE5Q8WWM1 108 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 MR1Q95460 341 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ZG16BQ96DA0 208 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 KTI12Q96EK9 354 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM208Q9BTX3 173 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 BCL2L10Q9HD36 194 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 KCMF1Q9P0J7 381 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 USP36Q9P275 1121 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 P2RX2Q9UBL9 471 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ELOA3CA0A087WX78 387 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 CD8B2A6NJW9 211 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ELOA3DA6NLF2 546 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 C5orf58C9J3I9 102 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TNFRSF10CO14798 259 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TNFSF14O43557 240 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SSX4O60224 188 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 TPST2O60704 377 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 OR2J2O76002 312 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 CRHP06850 196 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 CRYGCP07315 174 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 PET100P0DJ07 73 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 RNH1P13489 461 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 UGT2B7P16662 529 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 EPHA8P29322 1005 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 RPS19P39019 145 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 EIF1AXP47813 144 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 IDH2P48735 452 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 DGUOKQ16854 277 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 WBP2NLQ6ICG8 309 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 FRMPD2BQ6IN97 320 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ABI3BPQ7Z7G0 1075 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF614Q8N883 585 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 OR13H1Q8NG92 308 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 OR6T1Q8NGN1 323 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 OR5M8Q8NGP6 311 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 NT5CQ8TCD5 201 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SFXN5Q8TD22 340 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 GGHQ92820 318 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 RPL3LQ92901 407 aaKnown RBP4.66□□□□□ -1.66
TMEM260-210ENST00000556422 FAIM2Q9BWQ8 316 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 PRO1933Q9H354 126 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 CNTD2Q9H8S5 307 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 GPR27Q9NS67 375 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 GPR83Q9NYM4 423 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SEC14L3Q9UDX4 400 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 UBQLN2Q9UHD9 624 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 MMP17Q9ULZ9 603 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 SLC7A11Q9UPY5 501 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 MTCH2Q9Y6C9 303 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 LOC105369274A0A096LPK9 316 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 LOC102723532A0A0G2JNH3 316 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 A0A1W2PPV4 95 aa4.66□□□□□ -1.66
TMEM260-210ENST00000556422 LNP1A1A4G5 178 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms