RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 RAD51AP1Q96B01 352 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SLC25A36Q96CQ1 311 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 ZBED6CLQ96FA7 236 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-209ENST00000556353 FER1L6-AS2Q96M78 137 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SIGLEC12Q96PQ1 595 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SLC29A1Q99808 456 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 HDHD2Q9H0R4 259 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 LHX5Q9H2C1 402 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 OR51V1Q9H2C8 321 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 FAM124BQ9H5Z6 455 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-209ENST00000556353 COQ10BQ9H8M1 238 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 C12orf4Q9NQ89 552 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SMPD3Q9NY59 655 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-209ENST00000556353 ATXN10Q9UBB4 475 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 NEU3Q9UQ49 428 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 CA5BQ9Y2D0 317 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 PPIL1Q9Y3C6 166 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SNX10Q9Y5X0 201 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 CACNG2Q9Y698 323 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 MAD1L1Q9Y6D9 718 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 U3KQA8 63 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF469Q96JG9 3925 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SHANK1Q9Y566 2161 aa3.49□□□□□ -1.85
PRPF39-209ENST00000556353 SETD2Q9BYW2 2564 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-209ENST00000556353 MTORP42345 2549 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 DIDO1Q9BTC0 2240 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MDC1Q14676 2089 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ANKRD17O75179 2603 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 A0A075B6Q4 140 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 A0A0U1RQV5 110 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 A0A1B0GTQ1 180 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FAM230AA0A1W2PPH8 454 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SYCE3A1L190 88 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ARGFXA6NJG6 315 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SNTNA6NMZ2 147 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF716A6NP11 495 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 DNALI1O14645 258 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CHUKO15111 745 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 POLR1CO15160 346 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 LATO43561 262 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 VEGFDO43915 354 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 GRAP2O75791 330 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 LGI1O95970 557 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 GAS8O95995 478 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 AGTP01019 485 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 APOA1P02647 267 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PRB1P04280 392 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CRYGCP07315 174 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 LYNP07948 512 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 KRT7P08729 469 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SNRPAP09012 282 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PAEPP09466 180 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 OR9G9P0C7N8 305 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF735P0CB33 412 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 GPX3P22352 226 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CD1BP29016 333 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SPAM1P38567 509 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ACADVLP49748 655 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 STX17P56962 302 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 STX1BP61266 288 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SPIBQ01892 262 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 LRRC63Q05C16 580 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SCRN3Q0VDG4 424 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 LCP2Q13094 533 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MAB21L1Q13394 359 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 GPR50Q13585 617 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PTK6Q13882 451 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 RPS6KA1Q15418 735 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CST6Q15828 149 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CDO1Q16878 200 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF829Q3KNS6 432 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PTPN20Q4JDL3 420 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 GPAT3Q53EU6 434 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MPPE1Q53F39 396 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 HSP90AA4PQ58FG1 418 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NHSL2Q5HYW2 709 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CLVS2Q5SYC1 327 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TPRG1LQ5T0D9 272 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PIP5KL1Q5T9C9 394 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FAM91A1Q658Y4 838 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF776Q68DI1 518 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ISLR2Q6UXK2 745 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TMEM182Q6ZP80 229 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FAM183BPQ6ZVS7 135 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 BHLHA15Q7RTS1 189 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CCDC71Q8IV32 467 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MMAAQ8IVH4 418 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TIGD4Q8IY51 512 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ZNF683Q8IZ20 524 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SLC22A18ASQ8N1D0 253 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 STK40Q8N2I9 435 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ARHGAP18Q8N392 663 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TTLQ8NG68 377 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ANGPTL6Q8NI99 470 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FANK1Q8TC84 345 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NELFBQ8WX92 580 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 RIT1Q92963 219 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NUS1Q96E22 293 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms