RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RBM15BQ8NDT2 890 aaKnown RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 OR6N1Q8NGY5 312 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 SMAP2Q8WU79 429 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 BPIFA2Q96DR5 249 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 C1QTNF6Q9BXI9 259 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 GSX2Q9BZM3 304 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 ANKRD19PQ9H560 264 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 CISD1Q9NZ45 108 aaKnown RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 CRNNQ9UBG3 495 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 A0A1W2PRG6 482 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 BLOC1S5-TXNDC5H3BN57 136 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ARPC2O15144 300 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ARHGEF9O43307 516 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 BCL10O95999 233 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 SOD3P08294 240 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 IFI30P13284 250 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 TCN1P20061 433 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 FUT4P22083 530 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 AQP2P41181 271 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 PTH2RP49190 550 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 DAP3P51398 398 aaKnown RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ADAM8P78325 824 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 FOXD4Q12950 439 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ARSJQ5FYB0 599 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 Q5PR19 223 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 TSEN54Q7Z6J9 526 aaKnown RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 DTX2Q86UW9 622 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 NRMQ8IXM6 262 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 CCDC36Q8IYA8 594 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 DEFB107AQ8IZN7 70 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 FAM86B1Q8N7N1 296 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 FAM169BQ8N8A8 192 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 TMEM54Q969K7 222 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF566Q969W8 418 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 PERPQ96FX8 193 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 SLC25A44Q96H78 314 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 SLC38A2Q96QD8 506 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 CDRT15Q96T59 188 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 INIPQ9NRY2 104 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF701Q9NV72 531 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 FAIMQ9NVQ4 179 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 STX18Q9P2W9 335 aaKnown RBP10.06□□□□□ -0.8
SLIRP-205ENST00000556310 POU2F3Q9UKI9 436 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 LAMP3Q9UQV4 416 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 HIF3AQ9Y2N7 669 aa10.06□□□□□ -0.8
SLIRP-205ENST00000556310 A0A087WUU8 490 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 IGHV1-18A0A0C4DH31 117 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 A0A1W2PRQ8 180 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 CENPBD1B2RD01 187 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ATP6V1G2-DDX39BF2Z307 99 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 OVOL3O00110 214 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 SEC14L2O76054 403 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 IGKV3-15P01624 115 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 IGLV1-44P01699 117 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 IGHG1P01857 330 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 SEMG1P04279 462 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 F13BP05160 661 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 H1F0P07305 194 aaKnown RBP10.05□□□□□ -0.8
SLIRP-205ENST00000556310 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 SAGP10523 405 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-205ENST00000556310 RHCEP18577 417 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 TUBA1BP68363 451 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 TUBA4AP68366 448 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 VLDLRP98155 873 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 PRKCDQ05655 676 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 DGCR6Q14129 220 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ANKDD1AQ495B1 522 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 PRSS57Q6UWY2 283 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 B3GLCTQ6Y288 498 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF813Q6ZN06 617 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 MBOAT2Q6ZWT7 520 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 TUBA1AQ71U36 451 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 NOXO1Q8NFA2 376 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 MOSPD2Q8NHP6 518 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ASB10Q8WXI3 467 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 C7orf34Q96L11 122 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 NSMCE2Q96MF7 247 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 SEPHS2Q99611 448 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 FOXB1Q99853 325 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 TRAF4Q9BUZ4 470 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-205ENST00000556310 KATNB1Q9BVA0 655 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 NMNAT1Q9HAN9 279 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-205ENST00000556310 GLTPQ9NZD2 209 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 NDUFAF4Q9P032 175 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 ADAM21Q9UKJ8 722 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 POFUT2Q9Y2G5 429 aa10.05□□□□□ -0.8
SLIRP-205ENST00000556310 FAM32AQ9Y421 112 aaKnown RBP10.05□□□□□ -0.8
SLIRP-205ENST00000556310 EFCAB9A8MZ26 197 aa10.04□□□□□ -0.8
SLIRP-205ENST00000556310 E7EQL1 145 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms