RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 AQP2P41181 271 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 RBM34P42696 430 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 PTDSS1P48651 473 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 NUDT2P50583 147 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 SEC24CP53992 1094 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 MYBPC1Q00872 1141 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 MOSPD2Q8NHP6 518 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 FGFBP3Q8TAT2 258 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 ELAC2Q9BQ52 826 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 RHCGQ9UBD6 479 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 A4GNTQ9UNA3 340 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
EFCAB11-207ENST00000555608 MCIDASD6RGH6 385 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 CXCR6O00574 342 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 CCDC22O60826 627 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF682O95780 498 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 GIPRP48546 466 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 EFNA4P52798 201 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 CLRN1P58418 232 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 SELENOWP63302 87 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 SNTB2Q13425 540 aaKnown RBP12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 NUP37Q8NFH4 326 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 NANOS1Q8WY41 292 aaKnown RBP12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 FAM168AQ92567 244 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF566Q969W8 418 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF75AQ96N20 296 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 VRK1Q99986 396 aaPredicted RBP12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 MOV10Q9HCE1 1003 aaKnown RBP12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 MED31Q9Y3C7 131 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 SNX13Q9Y5W8 968 aa12.86□□□□□ -0.35
EFCAB11-207ENST00000555608 CHD3Q12873 2000 aaKnown RBP12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 A0A1W2PRG6 482 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 GSTA4O15217 222 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 RAB36O95755 333 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 BCL10O95999 233 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 BMP4P12644 408 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 NCK1P16333 377 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 GSK3BP49841 420 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 DAG1Q14118 895 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 RAB39AQ14964 217 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 CARTPTQ16568 116 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 MSMPQ1L6U9 139 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 C8orf82Q6P1X6 216 aaPredicted RBP12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 SVOPLQ8N434 492 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 RBM15BQ8NDT2 890 aaKnown RBP12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 ASB10Q8WXI3 467 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 SLC25A44Q96H78 314 aaPredicted RBP12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 ZNF442Q9H7R0 627 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 INIPQ9NRY2 104 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 TMEM38BQ9NVV0 291 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
EFCAB11-207ENST00000555608 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 B9A039 149 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 DHHO43323 396 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 TRMUO75648 421 aaKnown RBP12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 PDE5AO76074 875 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 SERPINA1P01009 418 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 IGHG1P01857 330 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 QDPRP09417 244 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 THRBP10828 461 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 IFI30P13284 250 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 NPR2P20594 1047 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 RAB1AP62820 205 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 TOP3AQ13472 1001 aaPredicted RBP12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 EFNB3Q15768 340 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 IGFN1Q86VF2 1251 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 PRIMA1Q86XR5 153 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 SLC22A24Q8N4F4 322 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 LZICQ8WZA0 190 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
EFCAB11-207ENST00000555608 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms