RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NCF4Q15080 339 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 GABRA6Q16445 453 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SAMD4BQ5PRF9 694 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 GPRC6AQ5T6X5 926 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 MEDAGQ5VYS4 303 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SPESP1Q6UW49 350 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ZNF621Q6ZSS3 439 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CYP4Z1Q86W10 505 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 NELFCDQ8IXH7 590 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SVOPLQ8N434 492 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 LIX1Q8N485 282 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 OR2L2Q8NH16 312 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 OR5B3Q8NH48 314 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 NUBPLQ8TB37 319 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SLC7A13Q8TCU3 470 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 PYROXD1Q8WU10 500 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CMTM7Q96FZ5 175 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ATXN7L3BQ96GX2 97 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 MRPL45Q9BRJ2 306 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 PELOQ9BRX2 385 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 DGCR6LQ9BY27 220 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ZYG11BQ9C0D3 744 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SP140LQ9H930 580 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CAB39LQ9H9S4 337 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 LY9Q9HBG7 655 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 AGPAT4Q9NRZ5 378 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ABCC13Q9NSE7 274 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ABCD2Q9UBJ2 740 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 YARS2Q9Y2Z4 477 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 RPL36Q9Y3U8 105 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 ADAMTS9Q9P2N4 1935 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 BCLAF3A2AJT9 711 aaKnown RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 E9PLD3 99 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 DCTN6O00399 190 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CCL21O00585 134 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 UGT1A9O60656 530 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 NOL4O94818 638 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 KLHL2O95198 593 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 VAPBO95292 243 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 BRI3O95415 125 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 FOXN2P32314 431 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CSKP41240 450 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 TNFSF9P41273 254 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 UCNP55089 124 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ATP6V0D1P61421 351 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ZNF33AQ06730 810 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 PMS2P3Q13401 168 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CCL14Q16627 93 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 RPEL1Q2QD12 228 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 C14orf28Q4W4Y0 310 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 AP1ARQ63HQ0 302 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ACOT4Q8N9L9 421 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CYB561A3Q8NBI2 242 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 NUP37Q8NFH4 326 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 OR7G1Q8NGA0 311 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 TFGQ92734 400 aaPredicted RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 FGF11Q92914 225 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ECHDC3Q96DC8 303 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 SEC22AQ96IW7 307 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 RNF170Q96K19 258 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 C9orf85Q96MD7 179 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 OR8B4Q96RC9 309 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 MCHR1Q99705 422 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 HCAR1Q9BXC0 346 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CHIAQ9BZP6 476 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 HDHD2Q9H0R4 259 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 OPN3Q9H1Y3 402 aaPredicted RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 KIR3DX1Q9H7L2 352 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 MOB1AQ9H8S9 216 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 NTN4Q9HB63 628 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ANKHQ9HCJ1 492 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ACP6Q9NPH0 428 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 SAMSN1Q9NSI8 373 aaKnown RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 MTRF1LQ9UGC7 380 aaKnown RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 RCL1Q9Y2P8 373 aaKnown RBP4.12□□□□□ -1.75
VRK1-203ENST00000555067 CPQQ9Y646 472 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CDH10Q9Y6N8 788 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 ADGRA3Q8IWK6 1321 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CDHR2Q9BYE9 1310 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 SBNO1A3KN83 1393 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 CNTNAP1P78357 1384 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 JCADQ9P266 1359 aa4.12□□□□□ -1.75
VRK1-203ENST00000555067 IGLV3-22A0A075B6J6 115 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 A0A1B0GWB2 263 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 A0A1W2PQ72 361 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 CENPXA8MT69 81 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 ZNF705EA8MWA4 302 aaPredicted RBP4.11□□□□□ -1.75
VRK1-203ENST00000555067 SOX15O60248 233 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 LCA5LO95447 670 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 CST4P01036 141 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 SNRPCP09234 159 aaKnown RBP4.11□□□□□ -1.75
VRK1-203ENST00000555067 HTR2CP28335 458 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 HTR1FP30939 366 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 EPHX2P34913 555 aa4.11□□□□□ -1.75
VRK1-203ENST00000555067 NDUFV3P56181 108 aaKnown RBP4.11□□□□□ -1.75
VRK1-203ENST00000555067 MRPS11P82912 194 aaKnown RBP4.11□□□□□ -1.75
VRK1-203ENST00000555067 FKBP3Q00688 224 aaKnown RBP4.11□□□□□ -1.75
VRK1-203ENST00000555067 ZNF146Q15072 292 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms